There are 4 repositories under fasta topic.
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
Renderers and renderer extensions for JupyterLab
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
GET_HOMOLOGUES: a versatile software package for pan-genome analysis
Goalign is a set of command line tools and an API to manipulate multiple sequence alignments. It is implemented in Go language.
FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences
pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)
Generate unique KMERs for every contig in a FASTA file
Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output directory. Auto-detects input file formats. Can submit the results to multiple repositories from the command line.
Bioinformatics library in Kotlin