bed

There are 0 repository under bed topic.

xjh22222228 / boomb
💣 Manage your pictures easily for Github/Gitee. 基于 Github/Gitee 轻松管理您的存储图库
bed github picture photo boomb gitee
Language:Vue 323
pyGeno
tariqdaouda / pyGeno
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
bioinformatics biology genomics proteomics genome genome-annotation genome-browser genome-sequencing genomes medical medicine cancer cancer-genomics cancer-genomes ensembl gtf vcf snps csv-parser bed
Language:Python 307
bedops / bedops
:microscope: BEDOPS: high-performance genomic feature operations
bedops c c-plus-plus bed genomics set set-theory conversion compression toolkit parallel pipeline bioinformatics
Language:C 292
picpic
MatrixAges / picpic
A awesome image host service driven by github pages and github actions.
gh-pages picture images bed picpic picgo
Language:JavaScript 157
chrovis / cljam
A DNA Sequence Alignment/Map (SAM) library for Clojure
clojure bioinformatics genomics sam bam vcf bcf fasta 2bit bed fastq wig bigwig gff
Language:Clojure 88
alexpreynolds / sample
Performs memory-efficient reservoir sampling on very large input files delimited by newlines
reservoir-sampling sampling c bed genomics bioinformatics
Language:C 68
junjunlab / transPlotR
An elegant package to visualize gene structures
bed bigwig gene linkvis r transcript visualization
Language:R 65
telatin / bamtocov
🏔 coverage extraction from BAM/CRAM files, supporting targets 📊
bioinformatics bam coverage alignment gff bed ngs
Language:Nim 58
niqingyang / wp-github-gos
利用 github api 实现的一个存储图片/附件的 wordpress 插件
wordpress plugins github api images bed image picture
Language:PHP 50
sbslee / fuc
Frequently used commands in bioinformatics
vcf bed fastq bioinformatics api cli bam sam cram maf visualization fasta gff gtf
Language:Python 45
telatin / covtobed
⛰ covtobed | Convert the coverage track from a BAM file into a BED file
bioinformatics bioinformatics-tool bioconda bed alignments bam-files sequence-coverage
Language:C++ 44
dputhier / pygtftk
A python package and a set of shell commands to handle GTF files
bioinformatics gene gtf bed bigwig genomics transcript exon cds genomic tss tts splicing dna-sequences intron ngs chip-seq rna-seq
Language:Python 42
quitnowapp / quitnow-sleep-time
The user is sleeping: don't launch that notification!
android notifications silence sleep bed
Language:Java 33
chunjie-sam-liu / useful-scripts
common useful script
bed gdc parallel
Language:Shell 31
JetBrains-Research / bioinf-commons
Bioinformatics library in Kotlin
2bit bam bed bioinformatics cancellable chip-seq dataframe dataset dna-sequence fasta fastq hmm hypothesis-testing kotlin methylation mixture progress sampling
Language:Kotlin 31
QuantGen / BEDMatrix
A matrix-like wrapper around PLINK .bed files
r r-pkg cran genetics genomics plink plink2 bed
Language:C 18
alejandrogzi / gxf2bed
Fastest GTF/GFF-to-BED converter chilling around
bed converter gene-annotation gff gtf high-performance
Language:Rust 14
alexpreynolds / soda
Python-based UCSC genome browser snapshot-taker and gallery-maker
bed genomics python ucsc visualization
Language:JavaScript 12
eloualiche / entrydatar
Public data on firm entry from the Census and the BLS in a R package
entrepreneurship employment bls cbp qcew bed
Language:R 12
alejandrogzi / bed2gtf
A high-performance BED-to-GTF converter written in Rust
bed gene-annotation genes gtf bioinformatics genome-annotation
Language:Rust 11
ctSkennerton / bioawk
BWK awk modified for biological data
bioinformatics fasta fastq sam vcf bed awk
Language:C 11
ptwz / bedscale
A digital scale to be integrated in furniture e.g. beds
health weight furniture bed
Language:Python 11
PlatonB / high-perf-bio
Open-source toolkit that simplifies and speeds up work with bioinformatics data. high-perf-bio allows you easily upload VCF, BED or arbitrary tables to DB and execute popular bioinformatic queries without MongoDB Query Language knowledge.
bed bioinformatics mongodb pymongo python tsv vcf vigg
Language:Python 9
JoeyTawadrous / SunriseAlarm
Sunrise Alarm: Surprise Clock - Never be late again
alarm alarm-clock alarms activity bed bedtime-calculator calm clock cycle monitor morning night nap rise sleep time tracker track health app
Language:Swift 8
alejandrogzi / bed2gff
BED-to-GFF3 converter that runs in parallel
bed bioinformatics gene-annotation genome-annotation gff3
Language:Rust 6
deeptools / deeptools_intervals
A python library for constructing interval trees with associated exon/annotation information
bioinformatics interval-tree gtf bed
Language:C 6
gmccauley / OctoPrint-CooldownNotification
A plugin to execute gcode commands when the print bed cools to a certain temperature
bed gcode octoprint temperature temperature-threshold
Language:Python 6
henryjuho / WGAbed
A package for handling whole genome alignments by Pádraic Corcoran and Henry Barton
genome-alignment bed bed-format whole-genome-alignment
Language:Python 6
tvangemert / OVRMC-BedderFuture
A modified version of OpenVR Motion Compensation that allows you to apply the transform to all tracked devices, enabling the use of VR while lying down.
bed lying reality steam steamvr tracking virtual vr
Language:C++ 6
cpp
zmercury / cpp
C++ - Second Semester Notes
programming c cpp notes sanothimi bed ict bicte
Language:C++ 6
cryy / BedwarsStatsReleases
Releases of the BedwarsStats project.
bedwars bed wars stats bedwars-stats bedwars-addon hypixel hypixel-bedwars
5
marcrusso / DROPA
DRIP Optimized Peak Annotator
peak annotation genomics gene python bed bioinformatics ngs
Language:Python 5
brentp / bedder-rs
an API for intersections of genomic data
bam bed bioinformatics cram genomics vcf
Language:Rust 4
DIYLaserBed
hotwolf / DIYLaserBed
An adjustable bed for a K40 laser cutter clone
bed co2 cutter k40 laser
Language:OpenSCAD 4
YoannPa / Gff3ToBed
gff3 bed awk genomics genome-annotation annotation-tool data-extraction gencode hgnc gff bioinformatics
Language:Shell 4
sama2689 / BED_Calc
A BED/EQD2 Calculator created using ESAPI. Allows the user to specify contour name and reference dose to use, and can extract DVH metrics to computed BED/EQD2 on (e.g. can compute the dose recieved by 10cc or by 10% of the volume to BED/EQD2). To use, build in visual studio and then run the compiled dlls directly from Eclipse.
esapi varian radiotherapy calculator eqd2 bed
Language:C# 3

bed

xjh22222228 / boomb

tariqdaouda / pyGeno

bedops / bedops

MatrixAges / picpic

chrovis / cljam

alexpreynolds / sample

junjunlab / transPlotR

telatin / bamtocov

niqingyang / wp-github-gos

sbslee / fuc

telatin / covtobed

dputhier / pygtftk

quitnowapp / quitnow-sleep-time

chunjie-sam-liu / useful-scripts

JetBrains-Research / bioinf-commons

QuantGen / BEDMatrix

alejandrogzi / gxf2bed

alexpreynolds / soda

eloualiche / entrydatar

alejandrogzi / bed2gtf

ctSkennerton / bioawk

ptwz / bedscale

PlatonB / high-perf-bio

JoeyTawadrous / SunriseAlarm

alejandrogzi / bed2gff

deeptools / deeptools_intervals

gmccauley / OctoPrint-CooldownNotification

henryjuho / WGAbed

tvangemert / OVRMC-BedderFuture

zmercury / cpp

cryy / BedwarsStatsReleases

marcrusso / DROPA

brentp / bedder-rs

hotwolf / DIYLaserBed

YoannPa / Gff3ToBed

sama2689 / BED_Calc