fastq-format

There are 0 repository under fastq-format topic.

seqan / seqan
SeqAn's official repository.
cpp14 bioinfomatics high-performance simd sequence-alignments alignment bwt indexing suffixarray htslib sam-bam fasta fastq-format blast seqan
Language:C++ 458
ngless-toolkit / ngless
NGLess: NGS with less work
haskell bioinformatics bioinformatics-pipeline samtools bwa next-generation-sequencing fastq-format fastq science ngs metagenomics genomics haskell-language
Language:Haskell 143
labsquare / FastQt
FastQC port to Qt5: A quality control tool for high throughput sequence data.
bioinformatics qt5 fastq fastq-format gui
Language:C++ 109
BioJulia / FASTX.jl
Parse and process FASTA and FASTQ formatted files of biological sequences.
bio biojulia fasta fasta-files fasta-format fastq fastq-files fastq-format file-format julia parsing
Language:Julia 57
cobilab / cryfa
A secure encryption tool for genomic data
encryption compact keygen fastq-format fasta-format genomics
Language:C++ 55
Griffan / FASTQuick
Ultra Fast NGS Data QC Tool
fastq-format quality-control pipeline
Language:C++ 27
BioJulia / ReadDatastores.jl
Datastores for reads, not your papa's FASTQ files.
bam-files bam-format bioinformatics bioinformatics-data biojulia biology fastq fastq-files fastq-format files format genomics genomics-data sam-bam sam-file sam-files sequencing storage
Language:Julia 11
biocpp / biocpp-io
BioC++ Input/Output library
biocpp fasta fastq fastq-format bcf bcftools biopython cplusplus-20 fasta-format header-only modern-cpp seqan sequence-analysis vcf vcf-format csv input-output tsv c-plus-plus
Language:C++ 8
sndrtj / fastqube
Binary representation of fastq files
ngs bioinformatics fastq-format
Language:Go 3
aaiezza / FLiCK
FLiCK - Format LeveragIng Compression frameworK
bam-files bioinformatics biology chemistry compression compression-algorithm computational-biology danger dna fasta fasta-files fasta-format fastq fastq-files fastq-format flick genetics nucleotides rna-seq sam-files
Language:Java 2
yangao07 / fxtools
fxtools: light-weight processing tool for FASTA/FASTQ/BAM format data
c fasta-sequences fastq-format bam-files samtools
Language:C 2
abhijeetsingh1704 / fastA2Q
simple and convenient program to convert fasta sequences to fastq sequences
fastq fq fastq-files fastq-format fasta-sequences fasta-format fasta sequence conversion
Language:Shell 1
laurentnoe / storm
Illumina (and SOLiD) sensitive read mapping tool (cloned from svn://scm.gforge.inria.fr/svnroot/storm/)
read-mapping illumina-sequencing spaced-seed simd-intrinsics openmp-parallelization sequence-alignment fasta fastq fasta-format fastq-format incremental indels sam-output sam-file illumina
Language:C 1
UDC-GAC / hsp
Hadoop Sequence Parser (HSP) library
big-data mapreduce hadoop dna-sequences fastq-format fasta-format
Language:Java 1
bio-pnpi / fastqtools
Set of tools to deal with sequences in FastQ format
bioinformatics fastq fastq-format primers sequence
Language:Python 0
darlenewagner / NGS_Plot_Widgets
Provides graphical and .json output for paired-end Next-Generation Sequencing (NGS) data as well as genome coverage data from .bed files. Requires Python 3.9.1 or higher.
json matplotlib python biopython fastq-files fastq-format
Language:Python 0
DongdongBoBio / sequencing-analysis
fastq-files fastq-format sequencing python python-script
Language:Python 0
evagunawan / SYLENS
SYLENS: Sampling Yielding LEss Noticeable Samples
downsampling fastq fastq-compression fastq-files fastq-format file-conversion sanger-sequencing solexa downsample subsample subsampling
Language:Python 0
liorzoue / dna-seq
dna sequence-alignments batch fasta fastq-format alignment
Language:C# 0
verheytb / fdemux
fdemux is a FASTA/FASTQ demultiplexer with support for (arbitrarily) fuzzy barcode matching, asymmetric barcoding, and parallel processing.
fasta-format fastq-format demultiplexing sequencing filtering
Language:Python 0
asadprodhan / Filtering-out-invalid-characters-from-fastq-reads
Filtering out invalid characters from fastq reads
fastq-format quality-control
Language:Shell
Lioscro / lfq
Lossless compression of FASTQ sequences.
fastq-compression fastq compression fastq-format lossless-data-compression
Language:C++