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A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
NGLess: NGS with less work
Detecting contamination in NGS data and multi-species analysis
Docker for 4DN Hi-C processing pipeline
Home Assistant integration - Spa Client
Whole Exome/Whole Genome Sequencing alignment pipeline
secondary analysis pipelines parallelized with apache spark
Nextflow pipeline for BWA, BWA2 and STAR alignments
Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.
Scalable and High Performance Variant Calling on Cluster Environments
The DKFZ alignment workflow plugin originally developed at the eilslabs
Ini adalah project Server-Side dari kelas BWA MERN 2021
Ini adalah project Client-Side dari kelas BWA MERN 2021
this is just impelementation from movie ticketing like cinema21, just simple and buat pusing. hahahah.
Highly optimized Burrow-Wheeler Aligner specifically for Illumina ~150 bp short-read alignment.
Map and post-process your bams for SNP calling
Parse pileup files, generate consensus fasta and calculate heteroplasmy per nucleotide
BWA-based alignment of CRISPR gRNA spacer sequences
R wrapper for BWA-backtrack and BWA-MEM aligners
Reference pipeline for somatic SNP detection using BWA for mapping, Mutect2 for calling and Annovar for annotation
Step-by-step approach in the analysis of Rainbow trout DNA from raw reads to population insights using fastqc, trimmomatic, bwa, vcftools, plink, and R.
Bulk Rna-seq Analysis
A Snakemake pipeline for copy number variant calling without normal tissue samples
Variantes genéticas de amostras de Rattus norvegicus utilizando GATK4
a design apps for play streaming game,