bgzf

There are 0 repository under bgzf topic.

• mdshw5 / pyfaidx

  Efficient pythonic random access to fasta subsequences

  pythonbioinformaticsfastaindexingdnaproteingenomicsbgzfsamtools
  Language:Python 442

• circulosmeos / gztool

  extract random-positioned data from gzip files with no penalty, including gzip tailing like with 'tail -f' !

  gzipgzip-decompressiongzip-compressiongzipped-filesgzip-streamindexingbgzipbgzfconcatenate-fileszlibzlib-decompression-librarycompressiondecompressioninflategzip-formatcompressed-filesgzip-data
  Language:C 123

• MatthewRalston / kmerdb

  Python bioinformatics CLI for k-mer counts and de Bruijn graphs

  bioinformaticsbgzfpython-clik-mer-countingk-mer-frequencyk-mer-hashingk-mer
  Language:Python 12

• cielavenir / 7bgzf

  bgzf/ciso/daxcr/dictzip/gzinga/migz/razf frontends using zlib/zlib-ng/7-zip/zopfli/libdeflate/miniz/libslz/igzip/cryptopp/kzip backends with parallel (de)compression. compilable with gcc/clang/icc/open64.

  bgzfbgzipcisodictzipgzingamigzrazfzopflilibdeflateminizslzpaperigzipcryptoppbioinformaticskzip
  Language:C 10

• vivimice / bgzf-randreader

  A BGZF random access reader library

  bgzfjavarandom-access
  Language:Java 6

• circulosmeos / bgztail

  Continuous tail command (like `tail -f`) for bgzip files

  gzipgzip-decompressiongzip-formatbgziptail-filesbgzf
  Language:Perl 5

• chrovis / bgzf4j

  bgzf4j is a compression library for BGZF (Blocked GNU Zip Format)

  javabgzf
  Language:Java 1

• innovate-invent / bampy

  Python implementation of htslib supporting BAM, SAM, and BGZF compression

  sambamhtshtslibsamtoolsbaibgzf
  Language:Python 1