u01ca200059

There are 0 repository under u01ca200059 topic.

• 4dn-dcic / pairix

  1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates

  hi-crandom-accessbgzipbioinformaticscpythonpypairixpairsu01ca200059ot2od032119
  Language:C 90

• 4dn-dcic / tibanna

  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

  awsaws-lambdaaws-step-functionbioinformaticscondacwlcwl-workflowdockerot2od032119pipelinessnakemakesnakemake-workflowu01ca200059wdlwdl-workflow
  Language:Python 71

• 4dn-dcic / docker-4dn-hic

  Docker for 4DN Hi-C processing pipeline

  hi-cbioinformaticsdockerpairixcoolerbwajuicerpairsqcu01ca200059ot2od032119
  Language:Common Workflow Language 60

• 4dn-dcic / fourfront

  Data portal for submitting and viewing genomic data

  ot2od032119u01ca200059
  Language:JavaScript 14

• 4dn-dcic / react-workflow-viz

  React component for visualizing CWL-like workflows (and similar data)

  ot2od032119provenanceu01ca200059visualizationworkflow
  Language:JavaScript 9

• 4dn-dcic / foursight

  Providing insight into your application using AWS infrastructure.

  ot2od032119u01ca200059
  Language:Python 7

• 4dn-dcic / Submit4DN

  Developing tools for data submission, curation and control

  ot2od032119u01ca200059
  Language:Python 4

• 4dn-dcic / utils

  various util modules shared amongst several projects in our organization

  ot2od032119u01ca200059
  Language:Python 4

• 4dn-dcic / fish_omics_format

  ot2od032119u01ca200059
  3

• 4dn-dcic / tibanna_ff

  This is an extension of Tibanna that integrates with 4DN/CGAP/SMaHT data portals.

  ot2od032119u01ca200059
  Language:Python 3

• 4dn-dcic / shared-portal-components

  Common components for use by 4DN and CGAP portal(s)

  ot2od032119u01ca200059
  Language:JavaScript 2

• 4dn-dcic / foursight-core

  ot2od032119u01ca200059
  Language:Python 1

• 4dn-dcic / snovault

  The SnoVault general purpose hybrid object-relational database

  ot2od032119u01ca200059
  Language:Python 1

• 4dn-dcic / 4dn-cloud-infra

  Cloud Formation templates for 4dn-dcic AWS environments

  ot2od032119u01ca200059
  Language:Python

• 4dn-dcic / jupyterhub-docker

  ot2od032119u01ca200059
  Language:Python