ancient-dna-sequences

There are 2 repositories under ancient-dna-sequences topic.

• mapDamage

  ginolhac / mapDamage

  mapDamage: tracking and quantifying damage patterns in ancient DNA sequences

  ancient-dna-sequencesngspythonr
  Language:Python 40

• grenaud / gargammel

  gargammel is an ancient DNA simulator

  ancient-dna-fragmentsancient-dna-sequencesmetagenomicssequence-simulatorsequencing
  Language:C++ 24

• cobilab / falcon

  A tool to infer metagenomic sample composition

  metagenomicsancientdnaancient-dna-sequencesfalconcompression-algorithmalignment-freefalcon-meta
  Language:C 21

• kkdey / aRchaic

  Exploration, clustering, visualization and classification of DNA damage patterns

  dna-damageancient-dna-sequencesclusteringvisualizationexploratory-data-analysis
  Language:R 18

• mnievesc / Ancient_mtDNA_Pipeline

  Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.

  ancient-dna-sequencesbam-filesbcftoolsbwafastq-filesfastqcmtdnapipelinesamtools
  Language:Shell 7

• cobilab / magnet

  An ultra-fast and high-sensitive tool to filter specific DNA content

  endogenousexogenousancient-dna-sequencesancient-genomesmagnetdata-compressionalignment-free
  Language:C 2

• maxibor / organdiet

  Metagenomics pipeline for human diet analysis using organelles genomes

  pipelinebioinformaticsancient-dna-sequencesmetagenomicsnextflowmicrobiome
  Language:Python 2

• epsalazarf / aDNAxRefPanel

  A pipeline to merge ancient DNA sequencing data with modern genotyping data

  ancient-dna-sequencesbioinformaticsgenotype-datahuman-geneticspopulation-genetics
  Language:Perl 0

• armanbilge / APG

  ancient population genomics

  population-genomicspopulation-geneticsbayesian-inferenceancient-dna-sequencescoalescentmcmc
  Language:Scala