sgrna-design

There are 0 repository under sgrna-design topic.

crisprVerse / crisprDesign
Comprehensive design of CRISPR gRNAs for nucleases and base editors
bioconductor bioconductor-package crispr crispr-cas9 crispr-design crispr-target genomics-analysis grna grna-sequence grna-sequences sgrna sgrna-design
Language:R 19
crisprVerse / crisprScore
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
bioconductor bioconductor-package crispr crispr-cas9 crispr-design crispr-target genomics grna grna-sequence grna-sequences scoring-algorithm sgrna sgrna-design
Language:Python 13
MDhewei / GuidePro
A multi-source ensemble predictor for prioritizing sgRNAs in CRISPR/Cas9 protein knockouts
sgrna-design crispr-cas9 protein-knockouts
Language:Jupyter Notebook 6
crisprVerse / crisprDesignData
Useful human and mouse data for the crisprVerse ecosystem
bioconductor bioconductor-package crispr crispr-analysis crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences sgrna sgrna-design
Language:R 5
crisprVerse / crisprViz
Visualization of CRISPR guide RNAs (gRNAs)
bioconductor bioconductor-package crispr crispr-analysis crispr-design grna grna-sequence grna-sequences sgrna sgrna-design visualization
Language:R 5
crisprVerse / crisprBowtie
Bowtie-based alignment of CRISPR gRNA spacer sequences
aligner bioconductor bioconductor-package bowtie crispr crispr-analysis crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences sgrna sgrna-design
Language:R 2
crisprVerse / crisprBwa
BWA-based alignment of CRISPR gRNA spacer sequences
aligner bioconductor bioconductor-package bwa crispr crispr-analysis crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences sgrna sgrna-design
Language:R 1
crisprVerse / crisprScoreData
Pre-trained models for the crisprScore package
bioconductor bioconductor-package crispr crispr-analysis crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences scoring-models sgrna sgrna-design
Language:R 1
etemadism / MutCrisper
MutCrisper: A Toolkit for Optimized gRNA Design in Base Editing Technology
dna mutation sgrna-design crisper
Language:Java 1
lucatorep / sgRNA_design_scripts
Script used to cdesign sgRNA sequences based on desired input parameters comparing different web-based tools
chopchop crispr crispr-cas9 rstudio sgrna sgrna-design crispr-era yeastcrispri
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