quality-control

There are 7 repositories under quality-control topic.

VladislavEremeev / QA_bible
“Библия QA” - это обновляемая база знаний объемом 560+ страниц
testing russian quality-assurance quality-assistance quality-engineering quality-control manual-testing manual guides guidebook translations starterkit starter-pack testing-tools career-guide qaautomation qa-automation faq faqs
1787
OpenGene / fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
fastq qc preprocessing filtering adapter overlap quality trimming splitting quality-control filter ngs bioinformatics umi sequencing illumina polyg duplication merging
Language:C++ 1764
MultiQC / MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
analysis bioconda bioinformatics data-visualization multiqc pypi python quality-control reporting seqera vizualisation
Language:JavaScript 1163
bavc / qctools
QCTools (Quality Control Tools for Video Preservation) is a free and open source software tool that helps users analyze and understand their digitized video files through use of audiovisual analytics and filtering. QCTools is funded by the National Endowment for the Humanities and the Knight Foundation, and is developed by the Bay Area Video Coalition.
preservation quality-control video
Language:C++ 299
nipreps / mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
mri quality-control quality-reporter machine-learning neuroimaging
Language:Python 275
OpenGene / AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
quality-control fastq ngs sequencing bioinformatics overlap trimming filtering error qc adapter-trimming
Language:Python 201
crowd-kit
Toloka / crowd-kit
Control the quality of your labeled data with the Python tools you already know.
data-science data-mining crowd toloka labeling annotation aggregations python crowdsourcing quality-control truth-inference
Language:Python 192
JoniColeman / gwas_scripts
Codebook from my GWAS cookbook
gwas imputation quality-control
Language:R 175
DRL / blobtools
Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets
genome-assembly visualisation blobtools quality-control contamination
Language:Python 173
exussum12 / coverageChecker
Allows old code to use new standards
phpmd phpcs coverage filter quality-control quality standard-conform php diff phpunit standards standalone-php-library phpstan qa static-code-analysis jacoco phan pylint codeclimate hacktoberfest
Language:PHP 173
tobiasrausch / alfred
BAM Statistics, Feature Counting and Annotation
insert-size coverage-distribution sequencing quality read-counts quality-control alfred alignment-metrics feature-counting
Language:C++ 132
oxagast / ansvif
A Not So Very Intelligent Fuzzer: An advanced fuzzing framework designed to find vulnerabilities in C/C++ code.
fuzzer pentesting vulnerability quality-control fuzz-testing exploit fuzzing
Language:C++ 103
ai-med / quickNAT_pytorch
PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty
ai bayesian biomarkers brain-imaging computer-vision convolutional-neural-networks deep-learning machine-learning medical-imaging mri-images neuroanatomy pytorch quality-control segmentation uncertainty
Language:Python 99
biobakery / kneaddata
Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.
public biobakery tools quality-control kneaddata bowtie2
Language:Python 98
ccipd / MRQy
MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.
mri quality-control quality-assurance quality-metrics imaging machine-learning medical-imaging medical-image-processing medical-physics python
Language:JavaScript 88
armbian / os
Armbian operating system rolling releases provides automated nightly builds of maintained targets
automation autotest-framework distribution linux qa-automation quality-control release release-management version-control
Language:Shell 87
gdkrmr / dimRed
A Framework for Dimensionality Reduction in R
dimensionality-reduction manifold-learning framework r visualization high-dimensional-data quality-control
Language:R 72
Qoala-T / QC
Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
quality-control freesurfer mri machine-learning
Language:R 72
raamana / visualqc
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
neuroimaging anatomical-mri cortex neuroscience quality-control freesurfer mri-images medical-imaging outlier-detection fmri qc outlier-removal registration alignment
Language:Python 72
dgollahon / mutest
fork of mutant with inline disable comments and a few different mutations.
testing ruby mutation-testing lint rspec quality-control
Language:Ruby 71
ParkerLab / ataqv
A toolkit for QC and visualization of ATAC-seq results.
atac-seq quality-control visualization software tool
Language:C++ 62
Zaczero / osm-revert
⏪ OpenStreetMap Changeset Reverter — CLI + Website
diff-match-patch openstreetmap overpass-api python quality-control
Language:Python 57
aibolit
cqfn / aibolit
Static Analyzer for Java Code with Machine Learning in Mind
machine-learning machine-learning-algorithms quality-control static-analysis
Language:Java 50
kenithgrey / ggQC
ggQC
r quality-control qcc xmr ggplot2
Language:R 45
mpvqc / mpvQC
libmpv based application for quality control of videos
libmpv linux quality-control windows mpv
Language:QML 44
awslabs / sagemaker-defect-detection
Detect Defects in Products from their Images using Amazon SageMaker
deep-learning computer-vision sagemaker sagemaker-pytorch sagemaker-deployment defect-detection quality-control
Language:Python 43
cbielow / PTXQC
A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
drag-and-drop hacktoberfest heatmap match-between-runs maxquant metric mztab openms proteomics quality-control quality-metrics report
Language:HTML 42
MHKiT-Software / MHKiT-Python
MHKiT-Python provides the marine renewable energy (MRE) community tools for data processing, visualization, quality control, resource assessment, and device performance.
mhkit-python mhkit marine-renewable-energy quality-control visualization python
Language:Python 41
slowkow / picardmetrics
:vertical_traffic_light: Run Picard on BAM files and collate 90 metrics into one file.
picard bam-files bioinformatics quality-control rna-seq
Language:Shell 39
davidebolo1993 / NanoR
Nanopore data analysis in R
r oxford-nanopore nanopore-sequencing gridion-x5 minion quality-control
Language:R 38
GHPReporter / Ghpr.NUnit
Adapter for NUnit 3 (generate HTML report for NUnit 3)
nunit-console screenshot nuget test-automation addin reporting nunit report html quality-assurance quality-control qa nunit3 qa-automation-test qatools
Language:C# 35
runcharter
johnmackintosh / runcharter
Automating run chart analysis for faceted displays of data across multiple metrics or locations
nhs nhs-r-community quality-control quality-improvement quality-improvement-efforts chart-analysis healthcare r rstats rstats-package rdatatable
Language:R 35
one-shot-steel-surfaces
adipandas / one-shot-steel-surfaces
One-Shot Recognition of Manufacturing Defects in Steel Surfaces
python pytorch siamese-network manufacturing quality-control steel-defect deep-learning few-shot-learning one-shot-learning convolutional-neural-networks
Language:Jupyter Notebook 34
fgcz / prolfqua
Differential Expression Analysis tool box R lang package for omics data
proteomics-data-analysis rstats-package hypothesis-testing quality-control r-package differential-expression-analysis protein-quantification
Language:R 34
Concurrency-Lab / ParallelHelper
Parallel Helper is a static code analyzer for C# projects that supports the development of parallel and asynchronous code. The analyzer is built with the help of the .NET Compiler Platform (Roslyn) and is available as a NuGet package as well as a Visual Studio extension.
analyzer async asynchronous await best-practices bugs code-quality concurrency csharp dotnet nuget parallel quality-control roslyn static-code-analysis visual-studio
Language:C# 31
OpenImaging / miqa
A Medical Imaging Quality Assurance tool
artificial-intelligence medical-imaging quality-assurance quality-control vtk-applications kitware girder-4 hacktoberfest
Language:Jupyter Notebook 30

quality-control

VladislavEremeev / QA_bible

OpenGene / fastp

MultiQC / MultiQC

bavc / qctools

nipreps / mriqc

OpenGene / AfterQC

Toloka / crowd-kit

JoniColeman / gwas_scripts

DRL / blobtools

exussum12 / coverageChecker

tobiasrausch / alfred

oxagast / ansvif

ai-med / quickNAT_pytorch

biobakery / kneaddata

ccipd / MRQy

armbian / os

gdkrmr / dimRed

Qoala-T / QC

raamana / visualqc

dgollahon / mutest

ParkerLab / ataqv

Zaczero / osm-revert

cqfn / aibolit

kenithgrey / ggQC

mpvqc / mpvQC

awslabs / sagemaker-defect-detection

cbielow / PTXQC

MHKiT-Software / MHKiT-Python

slowkow / picardmetrics

davidebolo1993 / NanoR

GHPReporter / Ghpr.NUnit

johnmackintosh / runcharter

adipandas / one-shot-steel-surfaces

fgcz / prolfqua

Concurrency-Lab / ParallelHelper

OpenImaging / miqa