grna-sequences

There are 0 repository under grna-sequences topic.

crisprVerse / crisprDesign
Comprehensive design of CRISPR gRNAs for nucleases and base editors
bioconductor bioconductor-package crispr crispr-cas9 crispr-design crispr-target genomics-analysis grna grna-sequence grna-sequences sgrna sgrna-design
Language:R 23
crisprVerse / crisprScore
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
bioconductor bioconductor-package crispr crispr-cas9 crispr-design crispr-target genomics grna grna-sequence grna-sequences scoring-algorithm sgrna sgrna-design
Language:Python 20
crisprVerse / crisprVerse
Collection of R packages that work in harmony for CRISPR gRNA design
crispr crispr-analysis crispr-design crispr-target grna grna-sequence grna-sequences
Language:R 14
crisprVerse / Tutorials
Tutorials for the crisprVerse
bowtie cas12a cas13 crispr crispr-analysis crispr-cas crispr-design crispr-target genome-analysis grna grna-sequence grna-sequences
Language:TeX 13
crisprVerse / crisprViz
Visualization of CRISPR guide RNAs (gRNAs)
bioconductor bioconductor-package crispr crispr-analysis crispr-design grna grna-sequence grna-sequences sgrna sgrna-design visualization
Language:R 9
crisprVerse / crisprBase
Base functions and classes for CRISPR gRNA design
bioconductor bioconductor-package crispr crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences rpackage
Language:R 5
crisprVerse / crisprDesignData
Useful human and mouse data for the crisprVerse ecosystem
bioconductor bioconductor-package crispr crispr-analysis crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences sgrna sgrna-design
Language:R 5
crisprVerse / crisprBowtie
Bowtie-based alignment of CRISPR gRNA spacer sequences
aligner bioconductor bioconductor-package bowtie crispr crispr-analysis crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences sgrna sgrna-design
Language:R 3
crisprVerse / crisprScoreData
Pre-trained models for the crisprScore package
bioconductor bioconductor-package crispr crispr-analysis crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences scoring-models sgrna sgrna-design
Language:R 2
crisprVerse / crisprBwa
BWA-based alignment of CRISPR gRNA spacer sequences
aligner bioconductor bioconductor-package bwa crispr crispr-analysis crispr-cas9 crispr-design crispr-target grna grna-sequence grna-sequences sgrna sgrna-design
Language:R 1
Varun-Krishnan1 / Visualizing_CRISPR_Flag_Insertion
A program that allows you to visualize your gRNA sequence as well as homology arm primers in the context of the gene itself.
grna-sequences homology-arm-primers primers
Language:Python