pcr
There are 0 repository under pcr topic.
joybio / multiPrime
multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test: http://multiPrime.cn))
Language:Python 297acconeer / acconeer-python-exploration
Acconeer Exploration Tool
Language:Python 167grunwaldlab / metacoder
Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
Language:R 134gear-genomics / tracy
Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
Language:C++ 97- Language:C++ 89
- Language:C 82
OlivierLeBozec / viewts
Display PCR, DTS, PTS, bitrate, jitter of a mpeg TS.
Language:C++ 58sahuang / priconne-rainbow-fart
会长我挂树了 - 公主连结 vscode-rainbow-fart 扩展语音包 (Priconne extension vocal pack)
WhiteMagic2014 / WMagicBotR
基于Mirai 使用 java开发的 bot框架，在消息事件下封装了指令/权限指令 方便调用，内置公主连接/公主连结工会战功能（公会战改版后不再适用），接入chat-gpt
Language:Java 51In-silico PCR, primer design and padlock design for in-situ sequencing
Language:C++ 42biologger / speciesprimer
The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacterial species in complex ecosystems.
Language:Python 38quwubin / MFEprimer-2.0
MFEprimer-2.0: A fast thermodynamics-based program for checking PCR primer specificity
Language:Python 37Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
Language:JavaScript 31ChirikjianLab / LSG-CPD
[ICCV 2021] CPD with Local Surface Geometry (LSG-CPD)
Language:MATLAB 27jonas-fuchs / varVAMP
Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.
Language:Python 25kgoldman / ibmtss
This is a user space TSS for TPM 2.0. It implements the functionality equivalent to (but not API compatible with) the TCG TSS working group's ESAPI, SAPI, and TCTI API's (and perhaps more) but with a hopefully simpler interface.
Language:C 24Lattice-Automation / primers
A PCR primer tool for DNA assembly flows
Language:Python 24matdoering / openPrimeR
An R Package for Multiplex PCR Primer Design and Analysis
Language:R 23- Language:Java 20
- Language:R 20
pmjangid90 / StockMarket_Project
This project will give real analysis of Option chain along with PCR Graph and MaxPain gragh
Language:Python 20- Language:Python 17
finding conserved regions in highly diverse genomes
Language:Go 15nebiolabs / ampseer
Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing library they are read from. It is intended to differentiate between ARTIC v3, ARTIC v4, ARTIC v4.1, VarSkip 1a, VarSkip 2, Midnight and VarSkip Long primer sets sequenced by Illumina or ONT.
Language:Rust 14龙花菜，以公主连结Re:Dive和龙图为主要服务的QQ机器人。
Language:Python 13shyambhakta / wetlabcalc
Wetlab Calculator
zoldrax / primer-way
Overlapped primer design for entire coding sequence of the gene with specificity check
Language:Python 12kennethleungty / Principal-Component-Regression
Principal Component Regression - Clearly Explained and Implemented
Language:Jupyter Notebook 11mlesnoff / rnirs
Archived repo - This R Package is not developed anymore (only maintenance). It was replaced by R package rchemo
Language:R 11tdseher / addtag-project
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
Language:Python 10In-silico PCR amplification on complete genomes
Language:JavaScript 9RIVM-bioinformatics / AmpliGone
A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment
Language:Python 9- PrimerPoolerLanguage:C 8
