in-silico

There are 0 repository under in-silico topic.

geem-lab / overreact
⚛️📈 Create and analyze chemical microkinetic models built from computational chemistry data. Crafted at the @geem-lab.
automation chemical-kinetics cli computational-chemistry computational-chemistry-logfiles dsl first-principles in-silico library microkinetics modeling overreact python qrrho quantum-tunneling reactions rrho thermochemistry
Language:Python 51
gear-genomics / dicey
In-silico PCR, primer design and padlock design for in-situ sequencing
gear-genomics pcr primer primer-design in-silico sanger-sequencing amplicon amplicon-sequencing padlock in-situ-sequencing
Language:C++ 49
PyPEF
Protein-Engineering-Framework / PyPEF
PyPEF – Pythonic Protein Engineering Framework
machine-learning protein-sequences protein-fitness-prediction in-silico python3 regression protein-engineering
Language:Python 22
carboncopies / BrainGenix-NES
[Mirror of https://gitlab.braingenix.org/carboncopies/] BrainGenix-NES is a cutting-edge simulation platform for whole brain emulation research and development that supports digitally replicating both form and function of brain tissue. Developed by the Carboncopies Foundation's BrainGenix initiative, it complements the Virtual Brain Platform (VBP).
neuron whole-brain-emulation carboncopies-foundation in-silico neuroscience science-research brain-emulation-challenge virtual-brain-platform braingenix
Language:C++ 14
ArsoVukicevic / OpenMandible
OpenMandible: An open-source framework for highly realistic numerical modelling of lower mandible physiology
dentistry fef fea in-silico simulation teeth mandible modeling
Language:C++ 13
PyPEF
niklases / PyPEF
PyPEF – Pythonic Protein Engineering Framework
machine-learning protein-sequences protein-fitness-prediction protein-engineering in-silico python3 regression
Language:Python 13
gear-genomics / silica
In-silico PCR amplification on complete genomes
gear-genomics pcr in-silico primer-design primer sanger-sequencing amplicon
Language:JavaScript 9
geem-lab / overreact-guide
⚛️📈 Create and analyze chemical microkinetic models built from computational chemistry data
automation chemical-kinetics cli computational-chemistry computational-chemistry-logfiles dsl first-principles guide in-silico library microkinetics modeling overreact python qrrho quantum-tunneling reactions rrho thermochemistry website
Language:Jupyter Notebook 8
arnaudporet / kali
In silico therapeutic target discovery using network attractors: avoiding pathological phenotypes
biological-modeling biological-networks biological-simulation boolean-networks computational-biology drug-discovery in-silico regulatory-networks therapeutic-targets
Language:Go 5
tseemann / injecta
Insert genes into genomes to aid synthetic test data generation
bacterial-genomes synthetic-data genetics test-data-generator bioinformatics in-silico
Language:Perl 5
benjamindkilleen / SPIE-2022_cortical-breach-anticipation
Code for our paper at SPIE Medical Imaging 2022: "Toward Perception-based Anticipation of Cortical Breach During K-wire Fixation of the Pelvis"
image-guided-interventions deep-learning simulation in-silico pelvis-fracture
Language:Python 4
abhijeetsingh1704 / REDigest
REDigest: a Python GUI for In-Silico Restriction Digestion Analysis for Gene or Complete Genome Sequences
restriction-enzyme restriction restriction-digestion genes genome multifasta complete-genomes in-silico in-silico-restriction
Language:Python 2
CardiacModelling / hERG-binding-mechanisms
Source code and data for reproducing "The impact of uncertainty in hERG binding mechanism on in silico predictions of drug-induced proarrhythmic risk".
drug-binding drug-induced-arrhythmias herg in-silico uncertainty
Language:Python 2
forstertim / insidapy
In-silico data generation package. Easy and consistent generation of example data for chemical/biochemical reaction case studies.
in-silico modeling simulation
Language:Python 2
AhmedElsherbini / HTS_insilico_PCR
High throughput In-silico PCR
hts pcr high-troughput-pcr in-silico in-silico-pcr
Language:Perl 1
BlueBrain / brain-indexer
Create indexes of simple shapes and find all indexed elements that intersect with a query region.
connectome in-silico neuroscience spatial-index
Language:C++ 1
BlueBrain / functionalizer
Create a functional connectome from physical connections between cells
connectome-generation in-silico neuroscience
Language:Python 1
git-abra / Neuzy
Neuzy - Population-based Neuron Modelling
computational-neuroscience in-silico neuron neuroscience
Language:Python 1
moorugi98 / Hodgkin-Huxley_network
Model 3 HH neurons connected in different motifs and different axonal delays. Compute synchronization between spikes and information flow between them.
hodgkin-huxley-model synchronization information-theory neuroscience in-silico
Language:Jupyter Notebook 1
DrPaulValle / Bioestadistica-para-el-ajuste-de-datos-experimentales
Estimación de tasas de liberación de fármaco en hidrogeles
biostatistics in-silico nonlinear-regression pharmacokinetics drug-release
0
ecairrao / Molecular-Docking-of-Metformin
In silico simulation between metfomin and oestrogen receptors (ERalpha and ERbeta) and androgen receptors (AR)
metformin estrogen-receptor androgen-receptor docking in-silico
0
guillaume-gricourt / HmnRandomRead
A sequence-read simulator program for NGS
bioinformatics illumina in-silico next-generation-sequencing quality-control short-reads
Language:C 0
NoeDemange / Cage-Moleculaire
Génération de guides de cages moléculaires
cage-moleculaire generation generation-algorithms molecular-cage specifique substrat-specifique cheminformatics in-silico
Language:C 0
omicscodeathon / cdk1_crc
In silico identification of CDK1 inhibitors in colorectal cancer
cancer cdk1 docking drug-discovery in-silico inhibitors molecular-dynamics-simulation
0
BlueBrain / brain-indexer-test-data
Test data for brain-indexer
in-silico neuroscience spatial-index
Language:AGS Script

in-silico

geem-lab / overreact

gear-genomics / dicey

Protein-Engineering-Framework / PyPEF

carboncopies / BrainGenix-NES

ArsoVukicevic / OpenMandible

niklases / PyPEF

gear-genomics / silica

geem-lab / overreact-guide

arnaudporet / kali

tseemann / injecta

benjamindkilleen / SPIE-2022_cortical-breach-anticipation

abhijeetsingh1704 / REDigest

CardiacModelling / hERG-binding-mechanisms

forstertim / insidapy

AhmedElsherbini / HTS_insilico_PCR

BlueBrain / brain-indexer

BlueBrain / functionalizer

git-abra / Neuzy

moorugi98 / Hodgkin-Huxley_network

DrPaulValle / Bioestadistica-para-el-ajuste-de-datos-experimentales

ecairrao / Molecular-Docking-of-Metformin

guillaume-gricourt / HmnRandomRead

NoeDemange / Cage-Moleculaire

omicscodeathon / cdk1_crc

BlueBrain / brain-indexer-test-data