sanger-chromatograms

There are 0 repository under sanger-chromatograms topic.

gear-genomics / tracy
Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
alignment chromatogram crispr-analysis crispr-cas9 genetic-engineering indel indel-discovery pcr pcr-products sanger-chromatograms sanger-sequencing sanger-trace-alignment sequencing tracy variant-calling
Language:C++ 95
labsquare / CutePeaks
CutePeaks is a standalone Sanger trace viewer steered by a modern and user-friendly UI.
sanger-chromatograms ab1 scf
Language:C++ 38
gear-genomics / indigo
Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
indels crispr-cas9 crispr-analysis alignment sequencing sanger-chromatograms indel-discovery indigo pcr gear-genomics pcr-products chromatogram-traces sanger-sequencing alleles variant-calling variants
Language:JavaScript 30
ponnhide / sangerseq_viewer
sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.
sanger-chromatograms sanger-sequencing sanger-trace-alignment
Language:Python 26
cfutils
y9c / cfutils
🧬 Chromatogram File Utils, a package that integrates trace visualization, mutation calling and quality control for Sanger sequencing data.
biology bioinformatics sanger-chromatograms mutations
Language:Python 20
gear-genomics / teal
Sanger Trace Viewer
gear-genomics sanger sanger-chromatograms pcr trace
Language:JavaScript 7
gear-genomics / sage
Sanger Trace Alignment
gear-genomics sanger-chromatograms chromatogram pcr trace sanger-trace-alignment alignment
Language:JavaScript 4
bioinfweb / LibrAlign
A Java GUI library for displaying and editing multiple sequence alignments and attached raw- and metadata
bioinformatics multiple-sequence-alignment library gui gui-components swing swt metadata sanger-chromatograms
Language:Java 0
mdcjansen / DBA
DNA barcoding analysis pipeline
bioinformatics bioinformatics-analysis dna dna-alignment dna-barcode dna-barcoding dna-sequences genomics sanger-chromatograms species-identification blastn mega11 genbank-files genbank fasta ab1 phylogenetics phylogeny
Language:Python 0
sgelias / AbiOrganizer
Extract and distribute ab1 files from Sanger DNA sequencing to folders of their respective owners.
ab1-organizer primer sanger-sequencing sanger-chromatograms
Language:Python 0