Lattice Automation

Lattice-Automation

We make software solutions that enable synthetic biology workflows, pipelines, and best practices.

Boston, MA

https://latticeautomation.com/

Lattice Automation's repositories

seqviz

a JavaScript DNA, RNA, and protein sequence viewer

Language:TypeScriptMIT222 12 134

seqfold

nucleic acid folding

Language:PythonMIT76 7 18

icor-codon-optimization

RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8

Language:PythonMIT50 5 5

repp

repository-based plasmid design

Language:GoGPL-2.025 3 6

primers

A PCR primer tool for DNA assembly flows

Language:PythonMIT24 8 6

synbio

a DNA assembly library

Language:PythonMIT17 8 12

seqparse

Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format

Language:TypeScriptMIT10 3 4

constellation-js

Library for combinatorially specifying, constraining, and exploring genetic design spaces.

Language:JavaScriptMIT1 30

aws-codepipeline-jenkins-aws-codedeploy_linux

Use this sample when creating a four-stage pipeline in AWS CodePipeline while following the Four Stage Pipeline Tutorial. http://docs.aws.amazon.com/codepipeline/latest/userguide/getting-started-4.html

Language:RubyApache-2.0050