indel-discovery

There are 0 repository under indel-discovery topic.

tseemann / snippy
:scissors: :zap: Rapid haploid variant calling and core genome alignment
variant-calling haploid bacteria fastq-analysis snps vcf indel-discovery bioinformatics genomics
Language:Perl 440
gear-genomics / tracy
Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
chromatogram pcr tracy sanger-trace-alignment sanger-sequencing sequencing variant-calling alignment genetic-engineering pcr-products crispr-cas9 crispr-analysis indel indel-discovery sanger-chromatograms
Language:C++ 95
gear-genomics / indigo
Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
indels crispr-cas9 crispr-analysis alignment sequencing sanger-chromatograms indel-discovery indigo pcr gear-genomics pcr-products chromatogram-traces sanger-sequencing alleles variant-calling variants
Language:JavaScript 30
zlye / RVE
Code used to discover structural variants, SNP, Indels that were applied to rare variant analysis
indel-discovery structural-variation vcf
Language:Python 0
mcgml / AmpliconRealigner
Tool for realigning soft-clipped bases from amplicon reads
bioinformatics indel-discovery next-generation-sequencing
Language:Java