Joseph Min's repositories
pyseq-align
Python interface for seq-align C library
alaska-parse
Automated and friendly RNA-seq analysis (migrated to Parse Server)
alaska-sentry
Sentry On-Premise setup
info
Professional information. Resume, CV, assets used by Github pages website.
airflow
Apache Airflow - A platform to programmatically author, schedule, and monitor workflows
arbor-coding-challenge
Repository for the Arbor Biotechnologies internship coding challenge.
bebi103-9-2
Pip-installable package with functions used in hw9.2
biorxiv-title-bot
Powers the @biorxivtitlebot Twitter bot.
Cassiopeia
A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction
cs2_othello
Othello Bot for CS2
django-postgres
Template repository for setting up Django with Postgres DB
homepage
A lightweight, customizable single-page personal portfolio website template built with JavaScript and Sass
ist4-pcp-analysis
Command-line tool to help bulk execution and graph plotting for Caltech IST4 Programming Challenge.
kallisto
Near-optimal RNA-Seq quantification
pwiz
The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis software.
react-bootstrap
Template repository to set up a React app with Bootstrap
scNT-seq
Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)
scvi-tools
Deep probabilistic analysis of single-cell omics data
TissueEnrichmentAnalysis
This repository holds the scripts for a tissue enrichment tool, which uses a hypergeometric test, apt for C. elegans use.
Wooey
A Django app that creates automatic web UIs for Python scripts.