sam-files
There are 0 repository under sam-files topic.
BioJulia / BioAlignments.jl
Sequence alignment tools
Language:Julia 59- Language:Julia 27
Datastores for reads, not your papa's FASTQ files.
Language:Julia 11biodata-fun / htslib_howto
Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts
Language:C 10DoubleHelixApp / DoubleHelix
Genomic data manipulation tool
Language:Python 3- Language:Java 2
anazhmetdin / Chimaera
parsing SAM files to extract chimeric alignments and report each chimeric locus with its supporting reads
Language:C++ 2aobermayer4 / NGSDataParsing
Various scripts for working with NGS data in file formats such as VCF, BAM/SAM, and JSON
Language:Python 0mansikath / FASTQ-to-BAM
This repository streamlines the conversion of raw DNA sequencing data from FASTQ to BAM format, incorporating scripts that not only facilitate BAM conversion but also generate Sequence Alignment Map (SAM) files.
0sghignone / samtools
SAMtools and BCFtools (v1.10) for manipulating next-generation sequencing data, from bioconda
Language:Dockerfile- Python-Genome-Assembler
shliamin / Python-Genome-Assembler
This repository contains a Python-based genome assembler designed to perform k-mer spectrum-based error correction and generate SAM files for visualizing genome mappings. It supports genomic data analysis with a focus on identifying mutations relevant to antibiotic resistance.
Language:Python
