epidemiology
There are 55 repositories under epidemiology topic.
WorldHealthOrganization / app
COVID-19 App
Language:Dart 2101- awesome-coronavirus
soroushchehresa / awesome-coronavirus
🦠 Huge collection of useful projects and resources for COVID-19 (2019 novel Coronavirus)
Language:TypeScript 1491 - seirsplus
ryansmcgee / seirsplus
Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
Language:Python 597 DataForScience / Epidemiology101
Epidemic Modeling for Everyone
Language:Jupyter Notebook 247COVID-19-electronic-health-system / Corona-tracker
An easy-to-use PWA to monitor the user's wellness and learn about COVID-19.
Language:JavaScript 235CodeForPhilly / chime
COVID-19 Hospital Impact Model for Epidemics
Language:Python 208- EpiModelLanguage:R 203
InstituteforDiseaseModeling / covasim
COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions
Language:Python 192CSSEGISandData / COVID-19_Unified-Dataset
Unified COVID-19 Dataset
- Language:R 121
- Python-for-Epidemiologists
pzivich / Python-for-Epidemiologists
Tutorial in Python targeted at Epidemiologists. Will discuss the basics of analysis in Python 3
Language:Jupyter Notebook 109 - zEpidLanguage:Python 106
Circuitscape / Circuitscape.jl
Algorithms from circuit theory to predict connectivity in heterogeneous landscapes
Language:Julia 102- Language:C# 101
wxwx1993 / PM_COVID
Public Available Code and Data to Reproduce Analyses in "Air pollution and COVID-19 mortality in the United States: Strengths and limitations of an ecological regression analysis."
Language:R 97- Language:Python 91
- COVID-19-data
starschema / COVID-19-data
Unpivoted and cleaned data sets on the COVID-19 pandemic
Language:Jupyter Notebook 81 Source files for building the IDM EMOD disease transmission model.
Language:C++ 78- covid19-sir
lisphilar / covid19-sir
CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.
Language:Python 78 thoughtworks / epirust
An agent-based epidemiology simulation framework built in Rust
Language:Rust 77covid19-model / simulator
Code base for the epidemiological model introduced in the context of COVID-19
Language:HTML 67- MicrobeTrace
CDCgov / MicrobeTrace
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
Language:TypeScript 56 seandavi / sars2pack
An R package with over 50 highly cited, read-to-use, up-to-date COVID-19 pandemic data resources
Language:R 56- simulation_virus_covid-19
antonin-lfv / simulation_virus_covid-19
Simulating epidemics using Python
Language:Python 51 tirthajyoti / Covid-19-analysis
Analysis with Covid-19 data
Language:Jupyter Notebook 51ImpulsoGov / farolcovid
🚦🏥. Ferramenta de monitoramento do risco de colapso no sistema de saúde em municípios brasileiros com a Covid-19 • Monitoring tool & simulation of the risk of collapse in Brazilian municipalities' health system due to Covid-19
Language:Jupyter Notebook 48- Language:C++ 47
- Language:C++ 43
KendrickOrg / kendrick
Domain-Specific Modeling for Epidemiology
Language:Smalltalk 41AlgebraicJulia / AlgebraicPetri.jl
Build Petri net models compositionally
Language:Julia 40eebrown / data2019nCoV
COVID-19 Pandemic Data R Package
Language:R 40- AMR
msberends / AMR
A free, open-source and independent R package to simplify the analysis and prediction of Antimicrobial Resistance (AMR) and to work with microbial and antimicrobial data and properties, by using evidence-based methods.
Language:R 39 ecohealthalliance / EpiTator
EpiTator annotates epidemiological information in text documents. It is the natural language processing framework that powers GRITS and EIDR Connect.
Language:Python 38- Covid-19-Tracker
ankithans / Covid-19-Tracker
This is an Covid-19 tracker especially made for India
Language:Dart 37 - Language:JavaScript 36
ConnorDonegan / geostan
Bayesian spatial analysis
Language:R 35
