epidemic-simulations
There are 4 repositories under epidemic-simulations topic.
- seirsplus
ryansmcgee / seirsplus
Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
Language:Python 651 rajeshrinet / pyross
PyRoss: inference, forecasts, and optimised control of epidemiological models in Python
Language:Jupyter Notebook 164- covid19-sir
lisphilar / covid19-sir
CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.
Language:Python 108 petroniocandido / COVID19_AgentBasedSimulation
COVID-ABS: An Agent-Based Model of COVID-19 Epidemic to Simulate Health and Economic Effects of Social Distancing Interventions
Language:Python 80- Pandemic-Simulator
IvanHornung / Pandemic-Simulator
Simulate a pandemic with artificial life objects.
Language:Java 63 prajwalsouza / Epidemic-Simulation
An interactive inspired by 3Blue1Brown's 'Simulating an Epidemic' video.
Language:HTML 56LucaDiba / epidemic-simulator
A HTML/JavaScript simulator for an epidemc on a population
Language:JavaScript 23matsim-org / matsim-episim-libs
Epidemic simulation for MATSim
Language:Java 20MohamedHmini / D-PandiSIM
distributed pandemics simulator, uses the power of spark to generate huge bulks of contact-tracing data.
Language:Jupyter Notebook 17healthbadge / episimmer
Episimmer is an Epidemic Simulation Framework for Decision Support. It is a highly flexible system that can be easily configured to help take decisions during an epidemic in closed communities like university campuses and gated communities.
Language:Jupyter Notebook 16wesdoyle / python_epidemic_simulation
A crude simulation of an epidemic in Python with pygame visualization
Language:Python 16- MetaWards
metawards / MetaWards
MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling
Language:Python 13 - covid-19
p-j-r / covid-19
Stochastic SIR models; adding age-structures and social contact data for the spread of covid-19. Lattice model for identifying and isolating hotspots. This has been further developed into a network(graph) of multiple clusters(lattices) and tracing the infection in such a population.
Language:Jupyter Notebook 13 Immodal / simulating-an-epidemic
Based on Simulating an Epidemic by 3Blue1Brown, this interactive simulation lets the user explore their ideas experimentally and quantitatively in a limited fashion, and to understand the drastic effects minor changes in behaviour can have in our fight against any disease.
Language:JavaScript 12nwlandry / hypercontagion
Library for epidemics on hypergraphs
Language:Python 10- Language:Python 9
- BranchingProcessSimulator
plamentrayanov / BranchingProcessSimulator
Matlab Simulator of Continuous-time Multi-type Branching Processes in Random Environment. (UPDATE: includes examples for modelling the coronavirus epidemics (COVID-19, SARS-CoV-2)))
Language:MATLAB 9 epiverse-trace / bpmodels
Methods for simulating and analysing the sizes and lengths of chains from branching process models
Language:R 7[Not published - under active development] A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.
Language:R 7alaradirik / complex-networks
A collection of complex networks assignments
Language:Jupyter Notebook 6SamuelBrand1 / KenyaCoV
This repo contains the source code KenyaCoV, a simulation package for forecasting SARS-CoV-2 transmission in Kenya.
Language:Jupyter Notebook 6savithru-j / COVID-19-SL
Interactive tool for modeling the evolution of COVID-19 in Sri Lanka
Language:JavaScript 6JBris / sir-agent-based-modelling
Agent-based modelling of pandemics using the Susceptible, Infected, Recovered (SIR) framework.
Language:Jupyter Notebook 5lt-shy-john / covid19-vaccine-game-theory
Game theoretical modelling of COVID-19 vaccine adoption
Language:Python 5QuanticPony / Analysis-of-effectiveness-of-lockdown-policies-for-desease-containment
Trabajo de Fin de Grado de Física 2022
Language:Python 4- Language:R 4
[Not published - under active development] Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models
Language:R 3hygeng / humanflow
Official implementation for UIC-22 "HMES: A Scalable Human Mobility and Epidemic Simulation System with Fast Intervention Modeling"
Language:C++ 3J0HNN7G / epidemic-sim
An Epidemic Simulator with Usability in Mind
Language:Java 3- epidemic-modeling
marcpinet / epidemic-modeling
🦠 Python script that simulates a pandemic using moving dots with tweakable parameters and then generates a graph according to obtained values. Made as part of a school project.
Language:Python 3 arkaprabha10 / COVID-19-DATA-ANALYSIS
Data Analysis for COVID-19 trends
Language:Jupyter Notebook 2DataForScience / CoVID19
A Data Driven Approach to Understanding COVID-19 with NetworkX
Language:Jupyter Notebook 2doscsy12 / network_sci_analysis
Network data analysis using networkx, and gephi for visualisations.
networkxgraph-theorycomplexity-sciencenetwork-analyticsnetwork-robustnessairline-networkfailuresattacksnetwork-analysisepidemic-modelsir-modelvaccination-strategypandemic-simulatorepidemic-simulationsmonte-carlo-simulationviral-marketingsocial-networkcommunity-detectiongephi-visualizationsepidemiology-analysisLanguage:Jupyter Notebook 2nehalmuthu / Covid-Simulation-in-Federated-Environment
COVID prediction and simulation based on mobility data in federated environment
Language:Jupyter Notebook 2SiddhantAttavar / SimAID
A web app which allows local policy makers to run simulations of numerous epidemics and find out the best intervention strategies to use
Language:Python 2
