sir-model
There are 8 repositories under sir-model topic.
- graph-theory
je-suis-tm / graph-theory
Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Randomized Distributed, Vizing, Topological Sort, DFS, BFS
graph-theorymaximal-cliquesepidemic-modelsir-modeldynamic-systemrandom-graphagent-based-modelingcompartmental-modelcomplex-networkdynamic-networkagent-based-simulationminimum-spanning-treesminimum-spanning-treecomplex-systemsspatial-modelsbianconi-barabasibarabasi-albertsars-cov-2watts-strogatzgraph-coloringLanguage:Jupyter Notebook 395 - covid19-sir
lisphilar / covid19-sir
CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.
Language:Python 112 - BasicSIRModelLanguage:Python 25
PingEnLu / Time-dependent_SIR_COVID-19
Codes for the paper "A Time-dependent SIR model for COVID-19 with Undetectable Infected Persons"
Language:Python 19mjg211 / phaseR
Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems
Language:R 15- covid-19
p-j-r / covid-19
Stochastic SIR models; adding age-structures and social contact data for the spread of covid-19. Lattice model for identifying and isolating hotspots. This has been further developed into a network(graph) of multiple clusters(lattices) and tracing the infection in such a population.
Language:Jupyter Notebook 15 - MetaWards
metawards / MetaWards
MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling
Language:Python 14 DemetersSon83 / Mesa-SIR
A Mesa-based ABM library for epidemiological (SIR) modeling.
Language:Python 12SilverLinings89 / VirusSimulator
A virus simulation for pandemics based on the SIR-network concept.
Language:TypeScript 11UofUEpiBio / epiworldR
A general framework for quick epidemiological ABM models
Language:R 11paramrathour / Nonlinear-Dynamics
Files related to my Summer of Science Report on Nonlinear Dynamics
Language:TeX 10nishi1612 / Modelling-and-Simulation
CS302 Modelling and Simulation Weekly Assignments in python based on modelling different systems - SARS, Malaria, SIR
Language:Jupyter Notebook 9- Language:Python 9
parulm / spread_lockdown
A GitHub repo for the generation of a network model to represent society with various components, the spread of the disease on this network, and the calculation of reproduction number on these simulation results.
Language:Python 9adbecker / tsiR
tsiR: An R package for time-series Susceptible-Infected-Recovered models of epidemics
Language:R 8maufadel / SIR_on_Gnutella
Simulation of a SIR Epidemic process on the Gnutella p2p network on Python
Language:Jupyter Notebook 8spang-lab / TenSIR
SIR model parameter estimation using a novel algorithm for differentiated uniformization.
Language:Python 6tjxie / KUX_PandemicMacro
Macroeconomic dynamics and reallocation in an epidemic
Language:MATLAB 6CNC-IISER-BHOPAL / Disease-Models-with-Python-Mesa
This repository is meant as a facilitator for all those who want to learn agent based disease modelling using the mesa framework in python. When I started out, there were too few examples for this on the net. Thankful to the community helping me learn, here I will share some of my insights.
Language:Jupyter Notebook 5MatteoM95 / Network-Dynamics-and-Learning
Homework and exercises from course Network Dynamics and Learning - PoliTo
Language:Jupyter Notebook 5uros-bojanic / epidemic-modelling
[Computer Modeling] SIR/SIRS/SIRQ/ISIR/SEIR compartmental models for numerical epidemic modelling in MATLAB.
Language:MATLAB 5xingrucz / fudab.github.io
Official website @ Github with content including COVID-19.
Language:HTML 5acrooks2 / Four-Disease-Models
Comparing four modeling approaches: System Dynamics, Agent-based Modeling, Cellular Automata, and Discrete Event Simulation using a SIR model as an example
Language:NetLogo 4Cobord / Simple-ODEs
Various ODEs
Language:Jupyter Notebook 4gbennnn / sir-model-covid19
Implementation of the SIR model on the Impact of COVID-19 Misinformation in Indonesia
Language:Jupyter Notebook 4ngozzi / temporal-networks
Introduction to temporal networks and the activity driven framework with code
Language:Jupyter Notebook 4cgado12 / disseminationSimulator
A visualization in processing (java) that simulates how things spread inside a network.
Language:Processing 3- sirsimx
lorenzofelletti / sirsimx
Simple SIR Model Simulation
Language:JavaScript 3 migduroli / covid-uk-variant
More than a year after the onset of the CoVid-19 pandemic in the UK: lessons learned from a minimalistic model capturing essential aspects including social awareness and policy making
Language:Python 3NightMachinery / stochastic
My Julia megarepo; an infectious disease model, a Poisson picture redrawing filter, a colorful animator of a 2D ising model, and more.
Language:HTML 3binDebug3 / EVAdoption
(2024) Modeling electric vehicle adoption with differential equations by Dallin Stewart, Jeff Hansen, Gwen Martin, Eliza Powell
Language:Jupyter Notebook 2defunctdreams / infectious-disease-simulation
A program to visualise simulations of an infectious disease spreading through a procedurally generated basic town.
Language:Python 2Devadeut / MDF-SIR-Model
This application simulates and visualizes the SIR model for infectious disease spread.
Language:Jupyter Notebook 2JBris / sbi-epidemiology
Simulation based inference for epidemiology
Language:HTML 2meiuxx / ABM_SIR_SEIR
Agent-based epidemic modeling using SIR and SEIR models
Language:Python 2paololapo / SIRS_model_on_graphs
Generalization of the famous SIR epidemiological model considering also virus variants and reinfections. Scale-free network via Barabási–Albert model.
Language:C++ 2
