There are 8 repositories under sir-model topic.
Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Randomized Distributed, Vizing, Topological Sort, DFS, BFS
CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.
Codes for the paper "A Time-dependent SIR model for COVID-19 with Undetectable Infected Persons"
Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems
Stochastic SIR models; adding age-structures and social contact data for the spread of covid-19. Lattice model for identifying and isolating hotspots. This has been further developed into a network(graph) of multiple clusters(lattices) and tracing the infection in such a population.
MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling
A Mesa-based ABM library for epidemiological (SIR) modeling.
A virus simulation for pandemics based on the SIR-network concept.
A general framework for quick epidemiological ABM models
Files related to my Summer of Science Report on Nonlinear Dynamics
CS302 Modelling and Simulation Weekly Assignments in python based on modelling different systems - SARS, Malaria, SIR
A GitHub repo for the generation of a network model to represent society with various components, the spread of the disease on this network, and the calculation of reproduction number on these simulation results.
tsiR: An R package for time-series Susceptible-Infected-Recovered models of epidemics
Simulation of a SIR Epidemic process on the Gnutella p2p network on Python
SIR model parameter estimation using a novel algorithm for differentiated uniformization.
Macroeconomic dynamics and reallocation in an epidemic
This repository is meant as a facilitator for all those who want to learn agent based disease modelling using the mesa framework in python. When I started out, there were too few examples for this on the net. Thankful to the community helping me learn, here I will share some of my insights.
Homework and exercises from course Network Dynamics and Learning - PoliTo
[Computer Modeling] SIR/SIRS/SIRQ/ISIR/SEIR compartmental models for numerical epidemic modelling in MATLAB.
Official website @ Github with content including COVID-19.
Comparing four modeling approaches: System Dynamics, Agent-based Modeling, Cellular Automata, and Discrete Event Simulation using a SIR model as an example
Various ODEs
Implementation of the SIR model on the Impact of COVID-19 Misinformation in Indonesia
Introduction to temporal networks and the activity driven framework with code
A visualization in processing (java) that simulates how things spread inside a network.
Simple SIR Model Simulation
More than a year after the onset of the CoVid-19 pandemic in the UK: lessons learned from a minimalistic model capturing essential aspects including social awareness and policy making
My Julia megarepo; an infectious disease model, a Poisson picture redrawing filter, a colorful animator of a 2D ising model, and more.
(2024) Modeling electric vehicle adoption with differential equations by Dallin Stewart, Jeff Hansen, Gwen Martin, Eliza Powell
A program to visualise simulations of an infectious disease spreading through a procedurally generated basic town.
This application simulates and visualizes the SIR model for infectious disease spread.
Simulation based inference for epidemiology
Agent-based epidemic modeling using SIR and SEIR models
Generalization of the famous SIR epidemiological model considering also virus variants and reinfections. Scale-free network via Barabási–Albert model.