neuroscience

There are 174 repositories under neuroscience topic.

NeuromatchAcademy / course-content
NMA Computational Neuroscience course
dynamic-systems machine-learning neuroscience stochastic-processes
Language:Jupyter Notebook 2631
mne-python
mne-tools / mne-python
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
ecog eeg electrocorticography electroencephalography machine-learning magnetoencephalography meg neuroimaging neuroscience python statistics visualization
Language:Python 2619
psychopy / psychopy
For running psychology and neuroscience experiments
experiment experiment-control experimental-design linguistics neuroscience psycholinguistics psychology psychophysics psychopy python science
Language:Python 1649
analyticalmonk / awesome-neuroscience
A curated list of awesome neuroscience libraries, software and any content related to the domain.
neuroscience mooc brain awesome-list matlab python intelligence awesome list hacktoberfest eeg meg nirs
1258
brainflow
brainflow-dev / brainflow
BrainFlow is a library intended to obtain, parse and analyze EEG, EMG, ECG and other kinds of data from biosensors
eeg eeg-analysis brain-computer-interface brain-machine-interface brain-control bci signal-processing biosensors biosignals biosensor emg emg-signal ecg brainflow neuroscience python muse openbci
Language:C++ 1253
snntorch
jeshraghian / snntorch
Deep and online learning with spiking neural networks in Python
pytorch spiking-neural-networks neuron-models python neural-networks machine-learning neuroscience snn spiking spike
Language:Python 1197
brian2
brian-team / brian2
Brian is a free, open source simulator for spiking neural networks.
biological-simulations brian brian2 code-generation computational-neuroscience differential-equations neuroscience python science simulation-framework spiking-neural-networks
Language:Python 904
neurreps / awesome-neural-geometry
A curated collection of resources and research related to the geometry of representations in the brain, deep networks, and beyond
awesome-list deep-learning differential-geometry equivariance group-theory neural-computation neural-networks neuroscience papers symmetry topology
873
rordenlab / dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
bids-format dcm dcm2niix dicom dicom-images gz jpeg jpeg-image mri mri-images mricrogl neuroimaging neuroscience nifti nifti-format nii nitrc research
Language:C++ 833
fieldtrip / fieldtrip
The MATLAB toolbox for MEG, EEG and iEEG analysis
meg eeg ecog analysis matlab dipole beamformer statistics time-frequency connectivity brain neuroscience neuroimaging bids fieldtrip donders seeg ieeg
Language:MATLAB 825
nengo / nengo
A Python library for creating and simulating large-scale brain models
nengo python neuroscience neural-networks
Language:Python 809
braindecode / braindecode
Deep learning software to decode EEG, ECG or MEG signals
deep-learning ecog eeg electrocorticography electroencephalogram electroencephalography magnetoencephalography meg neuroimaging neuroscience python pytorch
Language:Python 755
eselkin / awesome-computational-neuroscience
A list of schools and researchers in computational neuroscience
awesome-list awesome computational-neuroscience neuroscience computational-biology computational computational-linguistics computational-psychology computational-psychiatry mathematical-neuroscience
698
moabb
NeuroTechX / moabb
Mother of All BCI Benchmarks
brain-computer-interface machine-learning eeg neuroscience bci bci-benchmarks
Language:Python 654
csinva.github.io
csinva / csinva.github.io
Slides, paper notes, class notes, blog posts, and research on ML 📉, statistics 📊, and AI 🤖.
notes slides blog machine-learning statistics artificial-intelligence jekyll-themes website research awesome ml ai deep-learning machine-learning-tutorials neuroscience data-science computational-neuroscience python pytorch stats
Language:HTML 549
asoplata / open-computational-neuroscience-resources
A publicly-editable collection of open computational neuroscience resources
neuroscience neuroscience-data neural-simulators neuroimaging-data electrophysiological-data neuroscience-methods computational-neuroscience computational-biology awesome awesome-list open-science neural-simulations brain neuron-models simulation-neuroscience
538
lava-nc / lava
A Software Framework for Neuromorphic Computing
deep-learning neural-networks neuromorphic neuromorphic-computing neuroscience python
Language:Jupyter Notebook 537
brainrender
brainglobe / brainrender
a python based software for visualization of neuroanatomical and morphological data.
neuroscience python anatomy visualization
Language:Python 531
eyeloop
simonarvin / eyeloop
EyeLoop is a Python 3-based eye-tracker tailored specifically to dynamic, closed-loop experiments on consumer-grade hardware.
neuroscience eye-tracking senses video-oculography neurology psychology visual
Language:Python 479
SpikeInterface / spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
spike-sorting neuroscience electrophysiology
Language:Python 478
Kilosort
MouseLand / Kilosort
Fast spike sorting with drift correction for up to a thousand channels
spike-sorting neuroscience electrophysiology
Language:Python 435
neurolib-dev / neurolib
Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿‍🔬
neuroscience neuroscience-methods computational-neuroscience mean-field-theory neural-networks brain-network brain-simulations brain-modeling
Language:Python 394
neuronsimulator / nrn
NEURON Simulator
neuron neuroscience high-performance-computing simulation
Language:C++ 377
wmayner / pyphi
A toolbox for integrated information theory.
causality information neuroscience integrated-information modeling causation
Language:Python 365
neuropsychology / NeuroKit.py
A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).
biosignals python eeg eda neuroscience microstates hrv rsa heart-rate ecg physiology neurophysiology complexity entropy fractal-dimension neuropsychology psychology emg bvp ppg
Language:Python 361
fooof-tools / fooof
Parameterizing neural power spectra into periodic & aperiodic components.
ecog eeg electrophysiology lfp local-field-potential meg neuroscience oscillations power-spectral-density
Language:Python 348
MouseLand / suite2p
cell detection in calcium imaging recordings
imaging neuroscience data-analysis
Language:Jupyter Notebook 334
brainiak / brainiak
Brain Imaging Analysis Kit
distributed fmri machine-learning neuroimaging neuroscience
Language:Python 325
ReproNim / neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
neuroscience docker nipype reproducible-research singularity-container science containers linux dockerfile apptainer
Language:Python 325
neurotech-berkeley / neurotech-course
CS198-96: Intro to Neurotechnology @ UC Berkeley
eeg neurotech neuroscience neurofeedback event-related-potentials biosignals emg eeg-signals
Language:Jupyter Notebook 319
Neuromorphic-Computing-Guide
mikeroyal / Neuromorphic-Computing-Guide
Learn about the Neumorphic engineering process of creating large-scale integration (VLSI) systems containing electronic analog circuits to mimic neuro-biological architectures.
neuromorphic-computing neuromorphic-hardware neuromorphic-engineering neuromorphic neural-networks neural-engine neural-engineering neural-network neuronal-network neural-machine-translation neuron-models neural-processes neural-simulators neuroscience neural-rendering neocortex artificial-neural-networks brain-imaging neuroimaging neural-radiance-fields
Language:Python 294
BlueBrain / Brayns
Visualizer for large-scale and interactive ray-tracing of neurons
neurons visualisation ospray raytracing interactive embree neuroscience realtime-rendering large-scale volume-rendering websockets python brain photorealistic-based-rendering pathtracing ispc-compiler json-rpc
Language:C++ 286
raphaelvallat / antropy
AntroPy: entropy and complexity of (EEG) time-series in Python
python signal-processing entropy fractal-dimension numba neuroscience eeg complexity signal feature-extraction machine-learning algorithm
Language:Python 278
kylemath / DeepEEG
Deep Learning with Tensor Flow for EEG MNE Epoch Objects
eeg machine-learning neuroscience deep-learning keras-tensorflow
Language:Jupyter Notebook 263
ucdavis / erplab
ERPLAB Toolbox is a free, open-source Matlab package for analyzing ERP data. It is tightly integrated with EEGLAB Toolbox, extending EEGLAB’s capabilities to provide robust, industrial-strength tools for ERP processing, visualization, and analysis. A graphical user interface makes it easy for beginners to learn, and Matlab scripting provides enormous power for intermediate and advanced users.
eeglab erp eeg-data csd erp-data matlab eeglab-toolbox erplab event-related-potentials electroencephalography cognitive-science neuroscience
Language:MATLAB 263
AllenInstitute / bmtk
Brain Modeling Toolkit
modeling neural-networks neuroinformatics neuron neuroscience python simulation
Language:Python 261