neuroscience

There are 169 repositories under neuroscience topic.

NeuromatchAcademy / course-content
NMA Computational Neuroscience course
neuroscience machine-learning dynamic-systems stochastic-processes
Language:Jupyter Notebook 2587
mne-python
mne-tools / mne-python
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
python neuroscience electroencephalography magnetoencephalography electrocorticography machine-learning statistics visualization eeg meg ecog neuroimaging
Language:Python 2546
psychopy / psychopy
For running psychology and neuroscience experiments
science neuroscience experiment experimental-design experiment-control psychophysics psycholinguistics linguistics python psychopy psychology
Language:Python 1604
analyticalmonk / awesome-neuroscience
A curated list of awesome neuroscience libraries, software and any content related to the domain.
neuroscience mooc brain awesome-list matlab python intelligence awesome list hacktoberfest eeg meg nirs
1211
brainflow
brainflow-dev / brainflow
BrainFlow is a library intended to obtain, parse and analyze EEG, EMG, ECG and other kinds of data from biosensors
eeg eeg-analysis brain-computer-interface brain-machine-interface brain-control bci signal-processing biosensors biosignals biosensor emg emg-signal ecg brainflow neuroscience python muse openbci
Language:C++ 1197
snntorch
jeshraghian / snntorch
Deep and online learning with spiking neural networks in Python
pytorch spiking-neural-networks neuron-models python neural-networks machine-learning neuroscience snn spiking spike
Language:Python 1060
brian2
brian-team / brian2
Brian is a free, open source simulator for spiking neural networks.
python neuroscience science differential-equations spiking-neural-networks biological-simulations code-generation simulation-framework brian computational-neuroscience brian2
Language:Python 878
neurreps / awesome-neural-geometry
A curated collection of resources and research related to the geometry of representations in the brain, deep networks, and beyond
awesome-list deep-learning differential-geometry equivariance group-theory neural-computation neural-networks neuroscience papers symmetry topology
848
rordenlab / dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
dicom nifti mri mri-images research neuroscience neuroimaging jpeg-image jpeg dicom-images dcm nii gz nitrc dcm2niix mricrogl bids-format nifti-format
Language:C++ 803
fieldtrip / fieldtrip
The MATLAB toolbox for MEG, EEG and iEEG analysis
analysis beamformer bids brain connectivity dipole donders ecog eeg fieldtrip ieeg matlab meg neuroimaging neuroscience seeg statistics time-frequency
Language:MATLAB 802
nengo / nengo
A Python library for creating and simulating large-scale brain models
nengo python neuroscience neural-networks
Language:Python 798
braindecode / braindecode
Deep learning software to decode EEG, ECG or MEG signals
deep-learning eeg electroencephalogram electroencephalography neuroimaging neuroscience python pytorch meg magnetoencephalography electrocorticography ecog
Language:Python 691
eselkin / awesome-computational-neuroscience
A list of schools and researchers in computational neuroscience
awesome awesome-list computational computational-biology computational-linguistics computational-neuroscience computational-psychiatry computational-psychology mathematical-neuroscience neuroscience
656
moabb
NeuroTechX / moabb
Mother of All BCI Benchmarks
brain-computer-interface machine-learning eeg neuroscience bci bci-benchmarks
Language:Python 614
csinva.github.io
csinva / csinva.github.io
Slides, paper notes, class notes, blog posts, and research on ML 📉, statistics 📊, and AI 🤖.
ai artificial-intelligence awesome blog computational-neuroscience data-science deep-learning jekyll-themes machine-learning machine-learning-tutorials ml neuroscience notes python pytorch research slides statistics stats website
Language:HTML 532
asoplata / open-computational-neuroscience-resources
A publicly-editable collection of open computational neuroscience resources
neuroscience neuroscience-data neural-simulators neuroimaging-data electrophysiological-data neuroscience-methods computational-neuroscience computational-biology awesome awesome-list open-science neural-simulations brain neuron-models simulation-neuroscience
506
brainrender
brainglobe / brainrender
a python based software for visualization of neuroanatomical and morphological data.
neuroscience python anatomy visualization
Language:Python 505
lava-nc / lava
A Software Framework for Neuromorphic Computing
neuromorphic-computing neuromorphic deep-learning neural-networks neuroscience python
Language:Jupyter Notebook 498
eyeloop
simonarvin / eyeloop
EyeLoop is a Python 3-based eye-tracker tailored specifically to dynamic, closed-loop experiments on consumer-grade hardware.
neuroscience eye-tracking senses video-oculography neurology psychology visual
Language:Python 475
SpikeInterface / spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
electrophysiology neuroscience spike-sorting
Language:Python 402
Kilosort
MouseLand / Kilosort
Fast spike sorting with drift correction for up to a thousand channels
electrophysiology neuroscience spike-sorting
Language:Python 399
neurolib-dev / neurolib
Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿‍🔬
neuroscience neuroscience-methods computational-neuroscience mean-field-theory neural-networks brain-network brain-simulations brain-modeling
Language:Python 388
neuropsychology / NeuroKit.py
A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).
biosignals python eeg eda neuroscience microstates hrv rsa heart-rate ecg physiology neurophysiology complexity entropy fractal-dimension neuropsychology psychology emg bvp ppg
Language:Python 358
neuronsimulator / nrn
NEURON Simulator
neuron neuroscience high-performance-computing simulation
Language:C++ 353
wmayner / pyphi
A toolbox for integrated information theory.
causality information neuroscience integrated-information modeling causation
Language:Python 353
fooof-tools / fooof
Parameterizing neural power spectra into periodic & aperiodic components.
electrophysiology oscillations power-spectral-density neuroscience local-field-potential eeg meg ecog lfp
Language:Python 340
MouseLand / suite2p
cell detection in calcium imaging recordings
data-analysis imaging neuroscience
Language:Jupyter Notebook 325
brainiak / brainiak
Brain Imaging Analysis Kit
distributed fmri machine-learning neuroimaging neuroscience
Language:Python 322
ReproNim / neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
neuroscience docker nipype reproducible-research singularity-container science containers linux dockerfile apptainer
Language:Python 319
neurotech-berkeley / neurotech-course
CS198-96: Intro to Neurotechnology @ UC Berkeley
eeg neurotech neuroscience neurofeedback event-related-potentials biosignals emg eeg-signals
Language:Jupyter Notebook 312
BlueBrain / Brayns
Visualizer for large-scale and interactive ray-tracing of neurons
brain embree interactive ispc-compiler json-rpc large-scale neurons neuroscience ospray pathtracing photorealistic-based-rendering python raytracing realtime-rendering visualisation volume-rendering websockets
Language:C++ 286
raphaelvallat / antropy
AntroPy: entropy and complexity of (EEG) time-series in Python
python signal-processing entropy fractal-dimension numba neuroscience eeg complexity signal feature-extraction machine-learning algorithm
Language:Python 259
AllenInstitute / bmtk
Brain Modeling Toolkit
neuroscience modeling simulation python neural-networks neuroinformatics neuron
Language:Python 256
kylemath / DeepEEG
Deep Learning with Tensor Flow for EEG MNE Epoch Objects
eeg machine-learning neuroscience deep-learning keras-tensorflow
Language:Jupyter Notebook 254
ucdavis / erplab
ERPLAB Toolbox is a free, open-source Matlab package for analyzing ERP data. It is tightly integrated with EEGLAB Toolbox, extending EEGLAB’s capabilities to provide robust, industrial-strength tools for ERP processing, visualization, and analysis. A graphical user interface makes it easy for beginners to learn, and Matlab scripting provides enormous power for intermediate and advanced users.
eeglab erp eeg-data csd erp-data matlab eeglab-toolbox erplab event-related-potentials electroencephalography cognitive-science neuroscience
Language:MATLAB 248
Neuromorphic-Computing-Guide
mikeroyal / Neuromorphic-Computing-Guide
Learn about the Neumorphic engineering process of creating large-scale integration (VLSI) systems containing electronic analog circuits to mimic neuro-biological architectures.
neuromorphic-computing neuromorphic-hardware neuromorphic-engineering neuromorphic neural-networks neural-engine neural-engineering neural-network neuronal-network neural-machine-translation neuron-models neural-processes neural-simulators neuroscience neural-rendering neocortex artificial-neural-networks brain-imaging neuroimaging neural-radiance-fields
Language:Python 245