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Institute for Disease Modeling (InstituteforDiseaseModeling)

Institute for Disease Modeling

InstituteforDiseaseModeling

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IDM shapes global efforts to eradicate infectious disease and to achieve permanent improvements in health by using and sharing computational modeling tools.

Location:Seattle, WA, USA

Home Page:https://idmod.org

Twitter:@idmod_org

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Institute for Disease Modeling's repositories

covasim

COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions

Language:PythonLicense:MITStargazers:242Issues:24Issues:202

synthpops

Create synthetic populations for COVID-19 epidemic analyses.

Language:PythonLicense:NOASSERTIONStargazers:42Issues:15Issues:17

vis-tools

Visualization Toolkit

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IDM-CMS

IDM compartmental modeling software (CMS)

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hpvsim

Human papillomavirus simulator (HPVsim)

Language:PythonLicense:MITStargazers:5Issues:9Issues:3

idmtools

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cookiecutter-dash-ui

cookiecutter project for a dash UI

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laser

Light Agent Spatial modeling for ERadication

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PACE-HRH

PACE-HRH (Population-Aware Capacity Estimator for Human Resources for Health)

Language:RLicense:MITStargazers:2Issues:8Issues:143

abm-software-comparison

ABM software comparison for spatial disease modeling

License:MITStargazers:1Issues:0Issues:0

covasim_webapp

Webapp for Covasim

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EMOD-Generic

Source files for building IDM's EMOD computational epidemiology software.

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EMOD-Generic-Scripts

Demonstration simulations using Generic-Ongoing branch of EMOD

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malaria-model_validation

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PACE-HRH-UI

PACE-HRH-UI is a health capacity estimation tool built using R and Shinyapps

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SAEDashboard

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emod-dockerized-se

EMOD dockerized container for testing with Microsoft Science Engine

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pycms

Expose CMS functionality to Python via Python.NET

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cms-containerized

CMS in a Docker container with examples

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cookiecutter-python-library

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emod-genepi-archetypes

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emodpy-malaria-cotransmission

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emodpy-snt

SNT Workflow for EMODPY

Language:RLicense:MITStargazers:0Issues:6Issues:43

emodpy-typhoid

Python API for EMOD-Typhoid model

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IDMBuildTheDocs

Build the pre-release readthedocs

License:MITStargazers:0Issues:3Issues:2

malaria-hm

History matching approach to calibrating ShapeShifter- an empirical model of malaria infection and immunity

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rse_api

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rse_db

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selvaraj_vector_genetics_2020

Language:PythonStargazers:0Issues:7Issues:0

tskit

Analyse, create and manipulate tree sequences.

License:MITStargazers:0Issues:0Issues:0