epidemiological-models

There are 1 repository under epidemiological-models topic.

• rajeshrinet / pyross

  PyRoss: inference, forecasts, and optimised control of epidemiological models in Python

  covid-19infectious-disease-modelsepidemiological-predictionsepidemic-simulationscoronavirussars-cov-2compartment-modelsepidemiological-modelspyross
  Language:Jupyter Notebook 164
• memilio

  SciCompMod / memilio

  Modular spatio-temporal models for epidemic and pandemic simulations

  computer-scienceepidemiological-modelshigh-performance-computingmathematical-modellingnumerical-methodsscientific-computingsimulation
  Language:C++ 51

• storopoli / Turing-Workshop

  DEPRECATED IN FAVOR OF TuringLang/Turing-Workshop

  juliatutorialsturingbayesian-statisticsepidemiological-models
  Language:HTML 33

• JuliaEpi / MathEpiDeepLearning

  Awesome-spatial-temporal-data-mining-packages. Julia and Python resources on spatial and temporal data mining. Mathematical epidemiology as an application. Most about package information. Data Sources Links and Epidemic Repos are also included. Keep updating.

  bayesian-deep-learningbayesian-inferencecovid19-datadata-analysisdata-driven-modeldata-sciencedeep-learningepidemiological-modelsjuliamachine-learningmathematical-biologymathematical-epidemiologyneural-differential-equationsphysics-informed-neural-networksprobabilistic-machine-learningscientific-machine-learningstatisticstime-seriestime-series-analysisuniversal-differential-equations
  Language:JavaScript 29
• computational-infectious-disease

  chrisvoncsefalvay / computational-infectious-disease

  The companion repository to Computational Modeling of Infectious Disease by Chris von Csefalvay

  computational-epidemiologyepidemiological-modelsepidemiology
  Language:Jupyter Notebook 5

• JBris / sir-agent-based-modelling

  Agent-based modelling of pandemics using the Susceptible, Infected, Recovered (SIR) framework.

  agent-based-modelagent-based-modelingagent-based-simulationepidemic-modelepidemic-simulationsepidemicsepidemiologysiragent-basedagent-based-frameworkagent-based-modellingepidemicepidemic-modellingepidemiological-modelsepidemiological-predictions
  Language:Jupyter Notebook 5
• covid19-model

  GeoRouv / covid19-model

  📈 Examination of the impact of COVID-19 spread by using a custom epidemiological model.

  covid-19compartmental-modelepidemiological-modelsepidemiological-predictionscopasiseird-modelcoronavirus
  Language:Component Pascal 3

• Song921012 / MathEpiDeepLearningTutorial

  Tutorials on math epidemiology and epidemiology informed deep learning methods

  data-sciencemachine-learningstatisticsdeep-learningtime-seriesjuliadata-analysisbayesian-inferencemathematical-epidemiologymathematical-biologybayesian-deep-learningdata-driven-modelscientific-machine-learningneural-differential-equationsprobabilistic-machine-learninguniversal-differential-equationsepidemiological-modelsphysics-informed-neural-networks
  Language:Julia 3

• ichalkiad / covid19modelrisk

  This repository contains the code for the paper "Infection Rate Models for COVID-19: Model Risk and Public Health News Sentiment Exposure Adjustments", by Ioannis Chalkiadakis, Kevin Hongxuan Yan, Gareth W. Peters, Pavel V. Shevchenko.

  public-healthdecision-makingnatural-language-processingsentiment-analysisglarma-modelsgompertz-equationbayesian-inferenceepidemiological-modelscovid-19covid19covid19-datatext-miningpublic-news
  Language:R 2

• MicheleDiSabato / covid-19

  Forecast COVID 19 trend for three regions in Italy.

  covidcovid-19lstmrecurrent-neural-networkstime-seriestime-series-forecastingpythonepidemiological-models
  Language:Jupyter Notebook 2

• UCF-AEM / UCF-AEM

  We are the AI-Epidemiology Modeling group at UCF. Our work is focused on the efficient integration of deep learning and epidemiological modeling. The website is under construction and will be ready soon.

  deep-learningepidemiological-modelsepidemic-simulations
  2

• emdemor / cov19

  Modelling epidemic curve with SIRD model.

  epidemiological-modelscovidmcmcmonte-carlomarkov-chainpythonbrazilcoronavirussird-modelepidemiology
  Language:Python 1

• FilipePires98 / VideoViralizationTool

  YouTube Video Viralization Tool: a mathematical tool to optimize efforts of making viral youtube videos.

  matlabyoutubeyoutube-videoviralsir-modelepidemiological-modelsepidemiological-predictionsinformation-cascadeanalysis-toolsseo
  Language:MATLAB 1

• inavamsi / Custom_epidemic_model

  A simple UI to easily build and run custom epidemic models.

  epidemic-modelepidemic-simulationsepidemiological-models
  Language:Python 1

• MicheleDiSabato / NN_LearningOfRstar_COVID19

  Machine learning algorithms for the calibration of epidemiological compartmental models: application to the Italian COVID-19 outbreaks in Italy and to the newly developed SUIHTER model.

  artificial-neural-networkscompartmental-modelsepidemiological-modelsfeed-forward-neural-networksfeedforward-neural-networkmachine-learningordinary-differential-equations
  Language:MATLAB 1

• pskelsey / blacklegRandomForest

  A Random Forest model for predicting incidence of potato blackleg at the landscape-scale.

  cropepidemiological-modelsepidemiologymachine-learningpotatorandom-forestblacklegagriculture-researchcrop-protectiondiseasemodelmodelingpotato-disease
  Language:MATLAB 1

• akapet00 / covid-19-modelling-croatia

  Code for the paper "Modelling the SARS-CoV-2 epidemic in Croatia: a comparison of three analytic approaches"

  covid-19epidemiological-modelsmonte-carlo-simulation
  Language:Jupyter Notebook 0

• BlankTiger / SEIRD_model

  Educational tool used to visualize and solve the SEIRD epidemiological model with vaccination functionality. Allows the user to save results, parameters and more.

  pythoneducationepidemiological-modelsseird-modelseird-simulatorvaccinationsvaccination-trackerepidemiology-analysisepidemiology
  Language:Python 0

• elynch21 / Public-Health-490KR-Epidemiologic-Data-Management-and-Analysis

  Undergraduate Course Work from Public Health 490KR Epidemiologic Data Management & Analysis, Taught by Professor Katherine W. Reeves, PhD, MPH

  analyticsbiostatisticsdata-analysisdata-managementdata-sciencedatabaseepidemiological-dataepidemiological-modellingepidemiological-modelsepidemiological-surveillanceepidemiologyepidemiology-analysissasstata
  Language:Stata 0

• group9ine / conspiracy-networks

  Rumour spreading models on social networks

  complex-networksepidemiological-modelsrumour-spread
  Language:Jupyter Notebook 0
• fitting-covid-19

  sigeek / fitting-covid-19

  Final project for the course "Modelli Matematici per la Biomedicina" at Politecnico di Torino, academic year 2020/2021

  covid-19epidemiological-modelsitalymatlabseir-modelsir-model
  Language:Jupyter Notebook 0

• wtennant / arbo_gpu_fit

  Fitting a stochastic individual based model for arboviral disease.

  individual-mosquitoesmeta-populationindividual-based-modellingepidemiological-modelsepidemiologymodel-fittingmcmc
  Language:C++ 0

• denissekim / Simulation-Model

  A simulation model written in Python for the generation of spatial-temporal clinical data on infection outbreaks in hospitals

  agent-based-simulationepidemiological-modelspython3
  Language:Python

• ekinderdiyok / information-diffusion-on-twitter

  This repository hosts my master's thesis project.

  epidemiological-modelsmodeling-and-simulationtwitterinformation-diffusionsir-model
  Language:Jupyter Notebook

• epispot / manual

  The official manual to the epispot package

  compartmental-modelsdocsepidemiological-modelsepidemiologyinfectious-disease-modelsinfectious-diseases

• jovieon / PartII_BTBproject

  Code used to produce results and figures for BA Pathology project on the prospects of a BCG vaccine program in Great Britain. Developed by Joanna Vieira O'Neill, University of Cambridge.

  bacteriabovine-tbepidemiological-modelsinfectious-disease-dynamicsvaccination
  Language:R

• StochSS / Covid19_Modeling

  Epidemiological modeling in StochSS

  epidemiological-modelsstochasticsoftware
  Language:Jupyter Notebook

• TsilidisV / age-structured-SVeaiR-model

  Implementation of the numerical scheme for the solution of the age-structured SVeaiR model

  epidemiological-modelsnumerical-analysisnumerical-analysis-methodsnumerical-simulationssir-modelnumerical-schemesveair-modelpartial-differential-equations
  Language:Julia