infectious-disease-models
There are 3 repositories under infectious-disease-models topic.
rajeshrinet / pyross
PyRoss: inference, forecasts, and optimised control of epidemiological models in Python
Language:Jupyter Notebook 165- Pandemic-Simulator
IvanHornung / Pandemic-Simulator
Simulate a pandemic with artificial life objects.
Language:Java 65 - epispotLanguage:Python 15
- Language:HTML 14
speediedan / covid19
A set of "real-time" covid19 county-level dashboards w/ national and state choropleths for monitoring localized infection resurgences as distancing, testing and tracing measures evolve.
Language:Python 10- dataAndModelsCovid19
gasilva / dataAndModelsCovid19
Python code to analyze data and predict Covid-19 infection
Language:Jupyter Notebook 9 anjanatiha / Novel-Corona-Virus-Pandemic-Analysis-and-Modeling
Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
coronaviruscoronacoronavirus-trackingcoronavirus-real-timecoronavirus-analysiscoronavirus-infocoronavirus-globaloutbreakpublic-healthpublic-health-careinfectious-diseasesinfectious-disease-modelsinfectious-diseasedisease-spreaddisease-surveillancedisease-predictiondisease-modelingdata-sciencedata-analysisdata-visualizationLanguage:Jupyter Notebook 8CDCgov / multisignal-epi-inference
Python package for statistical inference and forecast of epi models using multiple signals
Language:Python 7- Language:R 7
fannybergstrom / nowcasting_covid19
Bayesian Nowcasting with application to COVID-19 fatalities in Sweden
Language:R 6HopkinsIDD / flepiMoP
The Flexible Epidemic Modeling Pipeline
Language:HTML 6toniesteves / covid19-chest-x-ray-detection
Detecção de COVID-19 a partir de imagens de raios X de tórax utilizando uma Deep Convolutional Neural Network otimizada.
coronaviruscoronavirus-trackingcoronavirus-analysiscoronavirus-infocoronavirus-globaloutbreakpublic-healthpublic-health-careinfectious-diseasesinfectious-disease-modelsinfectious-diseasedisease-spreaddisease-surveillancedisease-predictiondisease-modelingdata-scienceanalysis-datadata-visualizationcomputer-visiondeep-learningcovid-19Language:Jupyter Notebook 6- EpiILMCT
waleedalmutiry / EpiILMCT
Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
Language:Fortran 6 fudab / fudab.github.io
Official website @ Github with content including COVID-19.
Language:HTML 5IqbalLx / Coronavirus-in-Indonesia-Analysis
In this repository we aim to predict the peak of coronavirus cases in Indonesia, and when this pandemic will end. The data is retrieved from https://www.kawalcovid19.id/
Language:Jupyter Notebook 5IQTLabs / Viziflu
An open-source visualization tool to help make multi-model seasonal influenza forecasts more actionable for decision-makers
Language:JavaScript 5Taarak9 / Time-dependent-SEIRD-Model
A Time-Dependent SEIRD Model for Forecasting the COVID-19 Transmission Dynamics
Language:Python 5epiforecasts / idbrms
Population-level infectious disease modelling as an extension of brms.
Language:R 3- Language:Java 2
harirakul / Simulating-Infectious-Diseases
Agent-based visual simulation of infectious diseases with customizable parameters
Language:Python 2Holin-Chen / COVID-19-asymptomatic-infectiousness-in-Wuhan-China
An infectious disease modeling study on quantifying the magnitude of infectiousness from asymptomatic cases in Wuhan, China during outbreak of COVID-19.
Language:HTML 2- Language:Jupyter Notebook 2
ahmedh409 / COVID-19
A prediction of the number of COVID-19 infections during a fully-open (no preventative measures) semester for the University of Virginia using the SEIR model.
Language:Jupyter Notebook 1Jeremy-D-Harris / Asymptomatic_Transmission_COVID
Asymptomatic transmission of COVID-19: differences in time-scales and reproduction numbers, and potential correlations between disease and transmission
Language:MATLAB 1- predict_us-ltcf-covid-19
MetinBaki / predict_us-ltcf-covid-19
The focus of this project is to identify factors that cause COVID-19 outbreaks in US nursing home.
Language:Jupyter Notebook 1 nathangeffen / ziggie
Python package for infectious disease modelling
Language:Python 1- Language:Python 1
ID-Modelling-Lab / About
This is the official GitHub organization page for Infectious Disease Modelling Lab at SSHSPH, NUS, Singapore led by Dr. Hannah Clapham.
0MI2YorkU / Rnaught
An R package and web application for estimating the basic reproduction number of infectious diseases.
Language:R 0atjersland / SEIRVD-Model
Simulation of a SEIRVD model written in C#. Writes per day outputs to CSV for easy ingestion into a visualizer.
Language:C#Simulation of the SIR model written in C#. Writes per day outputs to CSV for easy ingestion into a visualizer.
Language:C#- Language:Python
folkehelseinstituttet / hepatitis_C_model
Model of hepatitis C transmission in Norway used in Whittaker, Midtbø and Kløvstad (submitted)
Language:Rjamesmbaazam / epiparameterDashboard
A dashboard for visualising the epidemiological parameters stored in the epiparameter package.
Language:HTMLRTIInternational / SyntheticPopulations
2010 U.S. Synthetic Population Ver. 1
