There are 2 repositories under maximum-likelihood topic.
Survival analysis in Python
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
Gauss Naive Bayes in Python From Scratch.
spatialreg: spatial models estimation and testing
Matlab package for learning to specify, compute, and estimate dynamic discrete choice models
R package that provides estimation methods for Gravity Models
BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins
Ancestral character reconstruction and visualisation for rooted phylogenetic trees
Channel estimations based on RLS, LMS and ML methods.
rapid phylogenomic tree calculator - A highly customizable framework for reproducible phylogenomic inference
Python notebooks for my graduate class on Detection, Estimation, and Learning. Intended for in-class demonstration. Notebooks illustrate a variety of concepts, from hypothesis testing to estimation to image denoising to Kalman filtering. Feel free to use or modify for your instruction or self-study.
Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México
B-Spline Density Estimation Library - nonparametric density estimation using B-Spline density estimator from univariate sample.
Markov-Switching State-Space Models
Scripts for file processing and analysis in phylogenetics and phylogeography
Perform template likelihood fits on binned datasets to extract contribution to the dataset from different processes .
An R package for maximum likelihood estimation of univariate densities.
Estimating unknown static channel coefficients on a communication system utilizing Maximum Likelihood Single-Shot Estimation algorithm.
Shell script pipeline for inferring ML gene trees for many loci (e.g. genomic RAD loci)
Partial Label Learning based on GMM
The numerical analysis files corresponding to arxiv: 2202.00962