gibbs-sampling

There are 4 repositories under gibbs-sampling topic.

yell / boltzmann-machines
Boltzmann Machines in TensorFlow with examples
ais annealed-importance-sampling boltzmann-machines contrastive-divergence-algorithm dbm deep-learning energy-based-model gibbs-sampling keras machine-learning mcmc pcd rbm restricted-boltzmann-machine sklearn-compatible tensorflow tensorflow-models variational-inference
Language:Jupyter Notebook 844
rwalk / gsdmm
GSDMM: Short text clustering
clustering gibbs-sampling nlp python short-text
Language:Python 352
wiseodd / probabilistic-models
Collection of probabilistic models and inference algorithms
probabilistic-models python machine-learning bayesian bayesian-inference mcmc gibbs-sampling variational-inference dirichlet-process
Language:Python 241
yangliuy / LDAGibbsSampling
Open Source Package for Gibbs Sampling of LDA
lda gibbs-sampling java topic-modeling topic
Language:Java 230
datquocnguyen / LFTM
Improving topic models LDA and DMM (one-topic-per-document model for short texts) with word embeddings (TACL 2015)
topic-modeling gibbs-sampling word-embeddings short-text
Language:Java 176
JoeZJH / Labeled-LDA-Python
Implement of L-LDA Model(Labeled Latent Dirichlet Allocation Model) with python
labeled-lda python llda python2 python27 incremental-update topic-modeling gibbs-sampling topic-model llda-model l-lda python3
Language:Python 120
lettier / lda-topic-modeling
A PureScript, browser-based implementation of LDA topic modeling.
lda topic-modeling data-science natural-language-processing nlp nlp-machine-learning purescript thermite machine-learning bayesian gibbs-sampling latent-dirichlet-allocation functional-programming clustering reactive-programming reactive machine-learning-algorithms bulma bulma-css text-mining
Language:PureScript 102
bioinformatics-centre / BayesTyper
A method for variant graph genotyping based on exact alignment of k-mers
variant-calling genotyping ngs variant-graphs dna-sequencing snvs indels structural-variation bayesian-inference gibbs-sampling k-mers
Language:C++ 86
datquocnguyen / jLDADMM
A Java package for the LDA and DMM topic models
topic-modeling lda gibbs-sampling short-text topic-models nlp
Language:Java 79
ExaScience / smurff
Bayesian Factorization with Side Information in C++ with Python wrapper
matrix-factorization latent-fact-model latent-features bayesian-inference gibbs-sampling python probabilistic-matrix-factorization
Language:C++ 70
cgre-aachen / bayseg
An unsupervised machine learning algorithm for the segmentation of spatial data sets.
segmentation python3 hidden-markov-models bayesian-methods gaussian-mixture-models gibbs-energy gibbs-sampling markov-chain machine-learning mixture-model geophysics
Language:Jupyter Notebook 61
pesoto / Text-Analysis
Explaining textual analysis tools in Python. Including Preprocessing, Skip Gram (word2vec), and Topic Modelling.
gibbs-sampling expectation-maximization web-scraping lda latent-dirichlet-allocation text-mining text-prediction skipgram neural-network textual-analysis gradient-descent python machine-learning word-embeddings word-embedding word2vec scraping-websites text-processing lstm long-short-term-memory-models
Language:Jupyter Notebook 57
physhik / Study-of-David-Mackay-s-book-
David Mackay's book review and problem solvings and own python codes, mathematica files
python data-science maximum-likelihood-estimation clustering-algorithm kmeans-clustering hamiltonian-monte-carlo gibbs-sampling monte-carlo-sampling mathematica-notebook
Language:Jupyter Notebook 57
single-cell-genetics / cardelino
Clone identification from single-cell data
single-cell scrna-seq somatic-mutations clonal-clustering gibbs-sampling
Language:R 57
vangj / py-bbn
Inference in Bayesian Belief Networks using Probability Propagation in Trees of Clusters (PPTC) and Gibbs sampling
bayesian-belief-networks inference approximate-inference-algorithm gibbs-sampling probability-propagation causal-inference causation bbn python-libraries turing-bbn pyspark-bbn py-bbn causality average-causal-effect
Language:Jupyter Notebook 55
kzhai / PyLDA
A Latent Dirichlet Allocation implementation in Python.
topic-modeling topic-models lda latent-dirichlet-allocation variational-inference gibbs-sampling gibbs-sampler bayesian-inference python natural-language-processing nlp machine-learning machine-learning-algorithms
Language:Python 50
aemcmc
aesara-devs / aemcmc
AeMCMC is a Python library that automates the construction of samplers for Aesara graphs representing statistical models.
mcmc term-rewriting samplers gibbs-sampling symbolic-computation hmc ppl
Language:Python 39
franzmohr / bvartools
Functions for Bayesian inference of vector autoregressive and vector error correction models
bayesian-var gibbs-sampling vector-autoregression bvar bayesian-inference vector-error-correction-model bayesian r-package bvecm mcmc
Language:R 30
scjrobertson / multisensor-lmb-filters
Matlab implementations of various multi-sensor labelled multi-Bernoulli filters
gibbs-sampling loopy-belief-propagation multi-object-tracking multi-sensor-fusion labelled-multi-bernoulli kalman-filter arithmetic-average-fusion geometric-average-fusion multi-object-tracker random-finite-set multi-object-bayes-filter arithmetric-average-lmb geometric-average-lmb iterated-corrector-lmb multi-sensor-lmbm parallel-update-lmb glmb-filter object-tracking state-estimation state-estimation-filters
Language:MATLAB 30
centre-for-humanities-computing / tweetopic
Blazing fast topic modelling for short texts.
dirichlet-process-mixtures gibbs-sampling machine-learning nlp topic-modeling tweet tweet-analysis gsdmm dmm mcmc python scikit-learn visualization
Language:Python 28
SSQ / Coursera-UW-Machine-Learning-Clustering-Retrieval
k-nearest-neighbors word-count tf-idf approximate-nearest-neighbor-search locality-sensitive-hashing kd-tree mapreduce k-means k-means-plus-plus mixture-model em-algorithm latent-dirichlet-allocation gibbs-sampling hierarchical-clustering divisive-clustering agglomerative-clustering dendrogram hidden-markov-models
Language:Python 27
rwalk / gsdmm-rust
GSDMM: Short text clustering (Rust implementation)
clustering-algorithm gibbs-sampling nlp rust short-text
Language:Rust 23
mr-easy / Gibbs-Sampling-Visualized
Visualization of Gibbs sampling for 2D Gaussian distribution
machine-learning-algorithms gibbs-sampling visualization gibbs-sampler mcmc gaussian
Language:Jupyter Notebook 22
mackelab / CorBinian
CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations
binary multivariate correlation mcmc entropy ising-model neurons maxent high-dimensional-data maximum-likelihood dichotomized-gaussian k-pairwise iterative-scaling gibbs-sampling specific-heat criticality heat-capacity bernoulli count maximum-entropy
Language:MATLAB 19
agrawal-priyank / machine-learning-clustering-retrieval
Built text and image clustering models using unsupervised machine learning algorithms such as nearest neighbors, k means, LDA , and used techniques such as expectation maximization, locality sensitive hashing, and gibbs sampling in Python
machine-learning-clustering unsupervised-machine-learning kmeans nearest-neighbor-search kd-trees locality-sensitive-hashing expectation-maximization gibbs-sampling python machine-learning retrieval
Language:Jupyter Notebook 18
hanyas / mimo
A toolbox for inference of mixture models
hierarchical-models mixture-models inference variational-inference markov-chain-monte-carlo vi mcmc gibbs-sampling clustering regression dirichlet-process-mixtures infinite-mixtures infinite-regression-mixtures mixture-of-experts gmm bayesian-gmm variational-bayes probabilistic-modeling stochastic-variational-inference
Language:Python 16
lee813 / pydpmm
Direct Gibbs sampling for DPMM using python.
dirichlet-process-mixtures gibbs-sampling
Language:Python 16
posterior / distributions
Low-level primitives for collapsed Gibbs sampling in python and C++
gibbs-sampling bayesian-inference python machine-learning
Language:C++ 16
smasuti / mcmc_gibbs
MCMC simulation using Gibbs sampling.
gibbs-sampling mcmc
Language:MATLAB 13
Tata0703 / social-DCM
social Discrete Choice Models in Python
social-network social-sciences admm gibbs-sampling mcem
Language:Jupyter Notebook 13
mr-easy / Restricted-Boltzmann-Machine
Python implementation of Restricted Boltzmann Machine (RBM). And an example on MNIST dataset.
restricted-boltzmann-machine rbm gibbs-sampling contrastive-divergence machine-learning-algorithms graphical-models
Language:Jupyter Notebook 12
lingxuez / URSM
A Unified RNA Sequencing Model (URSM) for joint analysis of single cell and bulk RNA-seq data.
single-cell hierarchical-models em-algorithm gibbs-sampling python rna-seq
Language:Python 10
fpetitjean / HDP
Accurate estimation of conditional categorical probability distributions using Hierarchical Dirichlet Processes
dirichlet-process bayesian-statistics gibbs-sampling bayesian-inference hierarchical-dirichlet-processes
Language:Java 8
itsayushthada / Bayesian-Statistics
Bayesian Statistics with R [Gibbs Sampling, Metrapolis Hastings, Regression, Logistic Regression, Poisson Regression, Multi Factor Anova, Hierarchical Modelling, Mixture Models]
gibbs-sampling bayesian-statistics jags poisson-regression logistic-regression anova regression hierarchical-models mixture-model
Language:Jupyter Notebook 8
laurimi / ddcrp-gibbs
Gibbs sampler for the Distance Dependent Chinese Restaurant Process
gibbs-sampling markov-chain-monte-carlo dirichlet-process-mixtures
Language:C++ 8
ryanneph / BNPSeg
Bayesian Non-Parametric Image Segmentation using HDP-MRF
bayesian-nonparametric-models bayesian-inference gibbs-sampling monte-carlo-sampling image-segmentation machine-learning medical-image-analysis cancer-imaging-research
Language:Python 8