Oleksiy Kozlov (amkozlov)

amkozlov

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Oleksiy Kozlov's repositories

raxml-ng

RAxML Next Generation: faster, easier-to-use and more flexible

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cellphy

CellPhy: accurate and fast probabilistic inference of single-cell phylogenies

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sativa

Semi-Automatic Taxonomy Improvement and Validation Algorithm

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eco-freq

Dynamic CPU/GPU power scaling to maximize renewable energy usage and reduce emissions

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ng-tutorial

RAxML-NG tutorial: datasets and scripts

ngtest

Regression tests for RAxML-NG (work in progress)

ExaML

ExaML code with experimental MIC (Xeon PHI) support

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raxml-qs

RAxML with support for base quality scores in input alignments

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bioconda-recipes

Conda recipes for the bioconda channel.

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bluetti_mqtt

MQTT interface for Bluetti power stations

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EBG

Tool for estimating the Felsenstein bootstrap support of phylogenetic trees

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electricitymap-contrib

A real-time visualisation of the CO2 emissions of electricity consumption

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idle-sleep

Automatically power off idle servers to save energy

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ipmi-grafana

Cluster node energy monitoring with IPMI, influxDB and grafana

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mislabels16-data

Data and scripts for 2016 SATIVA paper

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raxml-sativa

Branch of RAxML with EPA leave-one-out test and a couple of other tweaks needed for SATIVA

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slurm

Slurm: A Highly Scalable Workload Manager

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terraphast-one

An implementation of the SUPERB algorithm for analysis of phylogenetic terraces

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