reciprocal-blast-hits

There are 0 repository under reciprocal-blast-hits topic.

vinuesa / TIB-filoinfo
Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México
bash-scripting bioinformatics-scripts blast linux-shell maximum-likelihood model-selection multiple-sequence-alignment phylogenetics reciprocal-blast-hits tutorials bioinformatics pangenomics phylogenomics
Language:Shell 17
JJChenCharly / OrthoSLC
OrthoSLC: A pipeline to get Orthologous Genes using Reciprocal Best Blast Hit (RBBH) Single Linkage Clustering, indenpendent of relational database management system
reciprocal-blast-hits single-linkage-clustering core-genome microbe-subspecies lightweight pre-compiled independent-of-mysql bioinformatics dereplication jupyter-notebook cpp-callable-binary convenient-installation large-dataset large-scale pan-genome genomics
Language:Jupyter Notebook 5
ahishsujay / Find_Orthologs
Python script for carrying out reciprocal BLAST hits
reciprocal-blast-hits blast
Language:Python 3
kullrich / CRBHits
[CRBHits](https://github.com/kullrich/CRBHits) is a reimplementation of the Conditional Reciprocal Best Hit algorithm [crb-blast](https://github.com/cboursnell/crb-blast) in R.
bioinformatics dnds dnds-estimation kaks last pairwise-comparison r r-package reciprocal-blast-hits synteny joss
Language:HTML 2