Beast code in Giters

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.

Language:Jupyter NotebookGPL-3.07 30

emcore

Basic image processing library for Electron Microscopy

Language:C++6 13 5

relion-classranker

RELION automatic 2D class selection

Language:PythonGPL-3.06 5 1

datavis

Visualization tools for Scientific Data analysis (e.g Images and Tables)

Language:PythonGPL-3.05 9 1

emtools

Basic utilities for CryoEM data manipulation

Language:PythonGPL-3.05 6 1

relion-blush

Blush refinement - For use in RELION-5

Language:PythonMIT5 70

emtable

Simple module to deal with EM tabular data (aka metadata)

Language:PythonGPL-3.04 5 5

emvis

Visualization tools for EM data analysis (based on datavis)

Language:PythonGPL-3.04 9 2

em-testdata

EM related files (metadata, image, etc) used for running basic tests

Language:Starlark2 70

emhub-testdata

Some testdata for emhub

1 80

qscore

Q-score in pure Python without requiring Chimera

Language:PythonMIT1 40