medical-image-registration

There are 18 repositories under medical-image-registration topic.

• awesome-transformers-in-medical-imaging

  fahadshamshad / awesome-transformers-in-medical-imaging

  A collection of resources on applications of Transformers in Medical Imaging.

  awesome-listbrain-tumor-segmentationbrats2021clinical-reportcovid-19deep-neural-networksmedical-image-analysismedical-image-classificationmedical-image-detectionmedical-image-reconstructionmedical-image-registrationmedical-image-segmentationmedical-image-synthesismedical-imagingmedical-report-generatetransformersvision-transformers
  1204
• DeepReg

  DeepRegNet / DeepReg

  Medical image registration using deep learning

  convolutional-neural-networksdeep-learningdeep-neural-networksdeepregimage-fusionimage-registrationmedical-image-registrationneural-networktensorflow2
  Language:Python 572

• microsoft / Recursive-Cascaded-Networks

  [ICCV 2019] Recursive Cascaded Networks for Unsupervised Medical Image Registration

  medical-image-registrationunsupervised-learningiccv2019
  Language:Python 366

• natandrade / Tutorial-Medical-Image-Registration

  Medical Image Registration

  medical-image-registrationmedical-imagingmedical-image-processingmedical-image-analysistutorial-medical-image-registration
  Language:Jupyter Notebook 212

• xmindflow / Awesome-Implicit-Neural-Representations-in-Medical-imaging

  [ICCV 2023] A curated list of resources on implicit neural representations in Medical Imaging

  compressionimplicit-neural-representationinrmedicalnerfrenderingsegmentationreconstructionregistrationsynthesisdeep-learningmedical-image-reconstructionmedical-image-registrationmedical-image-segmentationmedical-image-synthesismedical-imagingneural-rendering
  178

• KCL-BMEIS / niftyreg

  This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities

  medical-image-registration
  Language:C 143

• YipengHu / label-reg

  (This repo is no longer up-to-date. Any updates will be at https://github.com/DeepRegNet/DeepReg/) A demo of the re-factored label-driven registration code, based on "Weakly-supervised convolutional neural networks for multimodal image registration"

  medical-image-registrationconvolutional-neural-networksweakly-supervised-learningdeep-learningtensorflowimage-guided-interventions
  Language:Python 119

• uncbiag / uniGradICON

  The official website for uniGradICON: A Foundation Model for Medical Image Registration

  deep-learningmedical-image-analysismedical-image-registration
  Language:Python 87

• junyuchen245 / Fully_Unsupervised_CNN_Registration_Keras

  Fully unsupervised 2D/3D image registration with ConvNet (TensorFlow)

  medical-image-registrationimage-registrationunsupervised-learning3d-image-registrationloss-functionsregularizationsconvnet
  Language:Python 42

• Madhavaprasath23 / Awesome-Mamba-Papers-On-Medical-Domain

  A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration, and Beyond

  deeplearningmamba-state-space-modelsmedical-image-processingmedical-image-registrationmedical-image-segmentationsurveymedical-image-restoration
  36

• cilix-ai / on-the-fly-guidance

  [MICCAI 2024] On-the-Fly Guidance Training for Medical Image Registration. Pre-print available in link below.

  image-registrationmachine-learning-architecturemedical-image-registrationoptimization-methods3d-visionpseudo-supervision
  Language:Python 30

• xzluo97 / MvMM-RegNet

  MvMM-RegNet: A new image registration framework based on multivariate mixture model and neural network estimation (MICCAI 2020)

  medical-image-registrationgroupwise-registrationdeep-learningtensorflowprobabilistic-graphical-models
  Language:Python 30

• JunkangZhang / RetinalSegReg

  Joint Vessel Segmentation and Deformable Registration on Multi-Modal Retinal Images based on Style Transfer

  image-registrationstyle-transferretinal-imagesretinal-vessel-segmentationmedical-image-registrationfundus-images
  Language:Python 28

• MWod / DeepHistReg

  Code used to create the DeepHistReg submission to the ANHIR challenge.

  anhirimage-registrationhistologymicroscopydeep-registrationdeep-learningmedical-image-registration
  Language:Python 26

• ubern-mia / MIALab

  Medical Image Analysis Lab (MIALab), University of Bern

  medical-image-analysismachine-learningmedical-image-registration
  Language:Python 26

• simeks / deform

  Efficient dense deformable image registration

  image-registrationmedical-imagingmedical-image-registration
  Language:C++ 24

• xzluo97 / mutual-information-registration

  Mutual-Information Medical Image Registration: Theory and Examples

  information-theorylecture-notesmedical-image-registrationmultimodal-image-registrationmutual-informationpythonpytorch
  Language:Python 23

• tinymilky / DeDA

  DeDA: Differentiable Image Integration Library

  bilateral-filtergrid-samplinghough-transformimage-classificationimage-processingimage-segmentationimage-transformationsmedical-image-analysismedical-image-computingmedical-image-processingmedical-image-reconstructionmedical-image-registrationmedical-imagingneural-networksradon-transformbilateral-grid
  22

• xzluo97 / Diffeomorphic-demons

  TensorFlow implementation of the diffeomorphic demons algorithm for medical image registration

  medical-image-registrationdiffeomorphic-demonstensorflow
  Language:Python 21

• junyuchen245 / Preprocessed_IXI_Dataset

  Preprocessed IXI brain MRI dataset with subcortical segmentation

  public-datasetbrain-mriimage-registrationdatasetsmedical-imagingmedical-image-registrationmedical
  19

• xzluo97 / MvMM-Demo

  PyTorch implementation for multivariate mixture model on cardiac segmentation from multi-source images (TPAMI 2019)

  combined-computingmedical-image-segmentationmedical-image-registrationmultivariate-mixture-modelprobabilistic-graphical-modelspytorch
  Language:Python 18

• qiuhuaqi / cardiac-motion

  [STACOM-MICCAI 2019] Deep Learning Registration for Cardiac Motion Tracking

  pytorchdeep-learningmiccai-2019miccaicardiaccardiac-motionmedical-image-registrationmedical-imagemedical-image-processingmedical-image-computing
  Language:Python 17

• Computer-Assisted-Clinical-Medicine / Networks_for_Affine_Medical_Image_Registration

  Affine medical image registration using deep learning

  deep-learningimage-registrationmedical-image-registration
  Language:Python 16

• uncbiag / LiftReg

  Official repository for LiftReg: Limited Angle 2D/3D Deformable Registration.

  3d-reconstructionbackprojectiondeep-learningmedical-image-registration
  Language:Python 16

• dddraxxx / Medical-Reg-with-Volume-Preserving

  Code for the paper "Preserving Volume for Unsupervised Registration" (ICCV 2023 Poster)

  deep-learning3d-medical-imagesdiffeomorphismimage-alignmentimage-registrationmedical-image-registrationmedical-imagesunsupervised-learningvoxelmorphvolume-preserving
  Language:Python 13

• pykao / CT2MNI152

  This repository applies the affine and deformation transformation on the CT scan in the subject space, and register it to the MNI 1mm space

  medical-image-registrationcomputed-tomographymagnetic-resonance-imagingdeformation-transformationaffine-transformation
  Language:Python 10

• xzluo97 / X-metric

  X-Metric: An N-Dimensional Information-Theoretic Framework for Groupwise Registration and Deep Combined Computing (TPAMI 2023)

  groupwise-registrationimage-segmentationinformation-theorymaximum-likelihoodmedical-image-registrationpythonprobabilistic-graphical-modelsstatistical-modellingmutual-informationdeformable-registrationmotion-estimationmultimodalrigid-registration
  Language:Python 8

• HSoo0620 / Head-and-Neck-Registration

  Head and Neck Medical Image Registration

  head-and-neckmedical-image-registrationoar
  Language:Python 3

• PWB97 / BSpline

  Use Bspline in simpleITK to transform images and show the deformation flow

  simpleitkbsplinemedical-image-registration
  Language:Python 3

• Basel1991 / Projects

  Projects that I was part of during my Master's study in Medical Imaging and Applications Erasmus program (MAIA) between 2017-2019.

  machine-learningtransfer-learning-javacyclical-learning-rate-pythonskin-lesion-segmentation-opencvparallel-processingmedical-image-registrationmedical-image-segmentation
  Language:Jupyter Notebook 2

• anac0der / fnoreg

  [ICPR 2024] FNOReg: Resolution-Robust Medical Image Registration Method Based on Fourier Neural Operator

  deep-learningfourier-neural-operatorimage-registrationresolution-independentmedical-image-registrationneural-operators
  Language:Python 1

• CIG-UCL / MedicalImageRegistrationDemo

  Medical Image Registration Demo

  image-processingmedical-image-processingmedical-image-analysismedical-image-computingmedical-image-registration
  Language:MATLAB 1

• LovelyChaos / 3D-mutil-model-medical-registration-based-on-deep-learing

  Config files for my GitHub profile.

  3d-registrationdeep-learningdeep-neural-networksmedical-image-registrationmritransformer-models
  Language:Python 1

• PWB97 / pixelRL

  deep-reinforcement-learningmedical-image-processingmedical-image-registrationdeep-learning
  Language:Python 1

• Roldbach / SVRDA

  [Preprint] Official Implementation of SVRDA: A Web-based Dataset Annotation Tool for Slice-to-Volume Registration

  computer-visiondataset-annotationmedical-image-registrationslice-to-volume-registration
  Language:Python 0

• sxg / Register

  An Electron app to register medical images using BROCCOLI

  electronregistermrimedical-imagingmedical-image-registrationbroccolimotion-correction
  Language:JavaScript