medical-image-registration

There are 18 repositories under medical-image-registration topic.

awesome-transformers-in-medical-imaging
fahadshamshad / awesome-transformers-in-medical-imaging
A collection of resources on applications of Transformers in Medical Imaging.
transformers vision-transformers medical-imaging medical-image-analysis clinical-report medical-report-generate deep-neural-networks medical-image-segmentation medical-image-classification medical-image-detection medical-image-reconstruction medical-image-synthesis medical-image-registration covid-19 awesome-list brats2021 brain-tumor-segmentation
1147
DeepReg
DeepRegNet / DeepReg
Medical image registration using deep learning
image-registration medical-image-registration image-fusion deep-learning deep-neural-networks neural-network convolutional-neural-networks tensorflow2 deepreg
Language:Python 552
microsoft / Recursive-Cascaded-Networks
[ICCV 2019] Recursive Cascaded Networks for Unsupervised Medical Image Registration
medical-image-registration unsupervised-learning iccv2019
Language:Python 355
natandrade / Tutorial-Medical-Image-Registration
Medical Image Registration
medical-image-registration medical-imaging medical-image-processing medical-image-analysis tutorial-medical-image-registration
Language:Jupyter Notebook 203
xmindflow / Awesome-Implicit-Neural-Representations-in-Medical-imaging
[ICCV 2023] A curated list of resources on implicit neural representations in Medical Imaging
compression implicit-neural-representation inr medical nerf rendering segmentation reconstruction registration synthesis deep-learning medical-image-reconstruction medical-image-registration medical-image-segmentation medical-image-synthesis medical-imaging neural-rendering
141
KCL-BMEIS / niftyreg
This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities
medical-image-registration
Language:C 129
YipengHu / label-reg
(This repo is no longer up-to-date. Any updates will be at https://github.com/DeepRegNet/DeepReg/) A demo of the re-factored label-driven registration code, based on "Weakly-supervised convolutional neural networks for multimodal image registration"
medical-image-registration convolutional-neural-networks weakly-supervised-learning deep-learning tensorflow image-guided-interventions
Language:Python 117
uncbiag / uniGradICON
The official website for uniGradICON: A Foundation Model for Medical Image Registration
deep-learning medical-image-analysis medical-image-registration
Language:Python 49
junyuchen245 / Fully_Unsupervised_CNN_Registration_Keras
Fully unsupervised 2D/3D image registration with ConvNet.
medical-image-registration image-registration unsupervised-learning 3d-image-registration loss-functions regularizations convnet
Language:Python 40
xzluo97 / MvMM-RegNet
MvMM-RegNet: A new image registration framework based on multivariate mixture model and neural network estimation (MICCAI 2020)
medical-image-registration groupwise-registration deep-learning tensorflow probabilistic-graphical-models
Language:Python 28
JunkangZhang / RetinalSegReg
Joint Vessel Segmentation and Deformable Registration on Multi-Modal Retinal Images based on Style Transfer
image-registration style-transfer retinal-images retinal-vessel-segmentation medical-image-registration fundus-images
Language:Python 25
MWod / DeepHistReg
Code used to create the DeepHistReg submission to the ANHIR challenge.
anhir image-registration histology microscopy deep-registration deep-learning medical-image-registration
Language:Python 24
simeks / deform
Efficient dense deformable image registration
image-registration medical-imaging medical-image-registration
Language:C++ 24
ubern-mia / MIALab
Medical Image Analysis Lab (MIALab), University of Bern
machine-learning medical-image-analysis medical-image-registration
Language:Python 24
tinymilky / DeDA
DeDA: Differentiable Image Integration Library
bilateral-filter grid-sampling hough-transform image-classification image-processing image-segmentation image-transformations medical-image-analysis medical-image-computing medical-image-processing medical-image-reconstruction medical-image-registration medical-imaging neural-networks radon-transform bilateral-grid
22
miraclefactory / on-the-fly-guidance
[MICCAI 24'] On-the-Fly Guidance Training for Medical Image Registration. Pre-print available in link below.
image-registration machine-learning-architecture medical-image-registration optimization-methods 3d-vision pseudo-supervision
Language:Python 21
xzluo97 / Diffeomorphic-demons
TensorFlow implementation of the diffeomorphic demons algorithm for medical image registration
medical-image-registration diffeomorphic-demons tensorflow
Language:Python 20
junyuchen245 / Preprocessed_IXI_Dataset
Preprocessed IXI brain MRI dataset with subcortical segmentation
brain-mri datasets image-registration medical medical-image-registration medical-imaging public-dataset
19
xzluo97 / MvMM-Demo
PyTorch implementation for multivariate mixture model on cardiac segmentation from multi-source images (TPAMI 2019)
combined-computing medical-image-registration medical-image-segmentation multivariate-mixture-model probabilistic-graphical-models pytorch
Language:Python 18
qiuhuaqi / cardiac-motion
[STACOM-MICCAI 2019] Deep Learning Registration for Cardiac Motion Tracking
pytorch deep-learning miccai-2019 miccai cardiac cardiac-motion medical-image-registration medical-image medical-image-processing medical-image-computing
Language:Python 17
xzluo97 / mutual-information-registration
Mutual-Information Medical Image Registration: Theory and Examples
information-theory lecture-notes medical-image-registration multimodal-image-registration mutual-information python pytorch
Language:Python 17
Computer-Assisted-Clinical-Medicine / Networks_for_Affine_Medical_Image_Registration
Affine medical image registration using deep learning
deep-learning image-registration medical-image-registration
Language:Python 14
uncbiag / LiftReg
Official repository for LiftReg: Limited Angle 2D/3D Deformable Registration.
3d-reconstruction backprojection deep-learning medical-image-registration
Language:Python 14
dddraxxx / Medical-Reg-with-Volume-Preserving
Code for the paper "Preserving Volume for Unsupervised Registration" (ICCV 2023 Poster)
deep-learning 3d-medical-images diffeomorphism image-alignment image-registration medical-image-registration medical-images unsupervised-learning voxelmorph volume-preserving
Language:Python 11
pykao / CT2MNI152
This repository applies the affine and deformation transformation on the CT scan in the subject space, and register it to the MNI 1mm space
medical-image-registration computed-tomography magnetic-resonance-imaging deformation-transformation affine-transformation
Language:Python 8
xzluo97 / X-metric
X-Metric: An N-Dimensional Information-Theoretic Framework for Groupwise Registration and Deep Combined Computing (TPAMI 2023)
groupwise-registration image-segmentation information-theory maximum-likelihood medical-image-registration python probabilistic-graphical-models statistical-modelling mutual-information deformable-registration motion-estimation multimodal rigid-registration
Language:Python 8
PWB97 / BSpline
Use Bspline in simpleITK to transform images and show the deformation flow
bspline medical-image-registration simpleitk
Language:Python 3
Basel1991 / Projects
Projects that I was part of during my Master's study in Medical Imaging and Applications Erasmus program (MAIA) between 2017-2019.
machine-learning transfer-learning-java cyclical-learning-rate-python skin-lesion-segmentation-opencv parallel-processing medical-image-registration medical-image-segmentation
Language:Jupyter Notebook 2
LovelyChaos / 3D-mutil-model-medical-registration-based-on-deep-learing
Config files for my GitHub profile.
3d-registration deep-learning deep-neural-networks medical-image-registration mri transformer-models
Language:Python 1
PWB97 / pixelRL
deep-learning deep-reinforcement-learning medical-image-processing medical-image-registration
Language:Python 1
CIG-UCL / MedicalImageRegistrationDemo
Medical Image Registration Demo
image-processing medical-image-processing medical-image-analysis medical-image-computing medical-image-registration
Language:MATLAB
Roldbach / SVRDA
[Preprint] Official Implementation of SVRDA: A Web-based Dataset Annotation Tool for Slice-to-Volume Registration
computer-vision dataset-annotation medical-image-registration slice-to-volume-registration
Language:Python
sxg / Register
An Electron app to register medical images using BROCCOLI
electron register mri medical-imaging medical-image-registration broccoli motion-correction
Language:JavaScript

medical-image-registration

fahadshamshad / awesome-transformers-in-medical-imaging

DeepRegNet / DeepReg

microsoft / Recursive-Cascaded-Networks

natandrade / Tutorial-Medical-Image-Registration

xmindflow / Awesome-Implicit-Neural-Representations-in-Medical-imaging

KCL-BMEIS / niftyreg

YipengHu / label-reg

uncbiag / uniGradICON

junyuchen245 / Fully_Unsupervised_CNN_Registration_Keras

xzluo97 / MvMM-RegNet

JunkangZhang / RetinalSegReg

MWod / DeepHistReg

simeks / deform

ubern-mia / MIALab

tinymilky / DeDA

miraclefactory / on-the-fly-guidance

xzluo97 / Diffeomorphic-demons

junyuchen245 / Preprocessed_IXI_Dataset

xzluo97 / MvMM-Demo

qiuhuaqi / cardiac-motion

xzluo97 / mutual-information-registration

Computer-Assisted-Clinical-Medicine / Networks_for_Affine_Medical_Image_Registration

uncbiag / LiftReg

dddraxxx / Medical-Reg-with-Volume-Preserving

pykao / CT2MNI152

xzluo97 / X-metric

PWB97 / BSpline

Basel1991 / Projects

LovelyChaos / 3D-mutil-model-medical-registration-based-on-deep-learing

PWB97 / pixelRL

CIG-UCL / MedicalImageRegistrationDemo

Roldbach / SVRDA

sxg / Register