computational-neuroscience

There are 76 repositories under computational-neuroscience topic.

brian2
brian-team / brian2
Brian is a free, open source simulator for spiking neural networks.
python neuroscience science differential-equations spiking-neural-networks biological-simulations code-generation simulation-framework brian computational-neuroscience brian2
Language:Python 908
eselkin / awesome-computational-neuroscience
A list of schools and researchers in computational neuroscience
awesome-list awesome computational-neuroscience neuroscience computational-biology computational computational-linguistics computational-psychology computational-psychiatry mathematical-neuroscience
709
csinva.github.io
csinva / csinva.github.io
Slides, paper notes, class notes, blog posts, and research on ML 📉, statistics 📊, and AI 🤖.
ai artificial-intelligence awesome blog computational-neuroscience data-science deep-learning jekyll-themes machine-learning machine-learning-tutorials ml neuroscience notes python pytorch research slides statistics stats website
Language:HTML 550
asoplata / open-computational-neuroscience-resources
A publicly-editable collection of open computational neuroscience resources
awesome awesome-list brain computational-biology computational-neuroscience electrophysiological-data neural-simulations neural-simulators neuroimaging-data neuron-models neuroscience neuroscience-data neuroscience-methods open-science simulation-neuroscience
542
BrainCog-X / Brain-Cog
Brain-inspired Cognitive Intelligence Engine (BrainCog) is a brain-inspired spiking neural network based platform for Brain-inspired Artificial Intelligence and simulating brains at multiple scales. The long term goal of BrainCog is to provide a comprehensive theory and system to decode the mechanisms and principles of human intelligence and its evolution, and develop artificial brains for brain-inspired conscious living AI in future Human-AI symbiotic Society.
brain-inspired-computation brain-simulations computational-neuroscience spiking-neural-networks brain-inspired-ai
Language:Python 420
neurolib-dev / neurolib
Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿‍🔬
brain-modeling brain-network brain-simulations computational-neuroscience mean-field-theory neural-networks neuroscience neuroscience-methods
Language:Python 397
he4o
jiaxiaogang / he4o
螺旋熵减系统
agi artificial-general-intelligence helix learning-algorithm unsupervised-learning-algorithms unsupervised-machine-learning decision-system thinking-machine brain-inspired-computation brain-simulations brain-inspired-ai computational-neuroscience neuron-models neuromorphic-computing theory-of-helix
Language:Objective-C 320
CompCogNeuro / book
Computational Cognitive Neuroscience textbook
computational-neuroscience cognitive-neuroscience neural-networks neocortex learning memory hippocampus prefrontal-cortex basal-ganglia
Language:HTML 292
genn-team / genn
GeNN is a GPU-enhanced Neuronal Network simulation environment based on code generation for Nvidia CUDA.
computational-neuroscience hacktoberfest nvidia-cuda simulation spiking-neural-networks
Language:C++ 230
BluePyOpt
BlueBrain / BluePyOpt
Blue Brain Python Optimisation Library
python optimisations neuroscience parameter modelling electrophysiology neurons computational-neuroscience cross-platform biological-simulations evolutionary-algorithms genetic-algorithm
Language:Python 198
RatInABox
RatInABox-Lab / RatInABox
A python package for modelling locomotion in complex environments and spatially/velocity selective cell activity.
continuous ephys hippocampus locomotion motion neurons rat reinforcement-learning box grid-cells place-cells boundary-vector-cells trajectory computational-neuroscience modelling modelling-biological-systems neuroscience simulation gym gym-environment
Language:Python 174
mne-tools / mne-cpp
MNE-CPP: A Framework for Electrophysiology
neuroscience meg eeg computational-neuroscience c-plus-plus qt3d qt mne real-time cross-platform mne-cpp healthcare clinical qmake biomedical-informatics signal-processing medical-imaging visualization machine-learning analysis
Language:C++ 152
HELIX_THEORY
jiaxiaogang / HELIX_THEORY
螺旋熵减理论
agi helix theory-of-helix artificial-general-intelligence learning-algorithm unsupervised-learning-algorithms unsupervised-machine-learning decision-system thinking-machine computational-neuroscience neuromorphic-computing brain-inspired-computation neuron-models brain-inspired-ai brain-simulations
Language:Objective-C 136
computational-neuroscience / Computational-Neuroscience-UW
Python scripts that supplement the Coursera Computational Neuroscience course by the University of Washington
computational-neuroscience neural-models
Language:Jupyter Notebook 132
mrkrd / cochlea
Inner ear models for Python
python cochlea inner-ear model auditory computational-neuroscience neuroscience sound basilar-membrane inner-hair-cell
Language:Python 108
asoplata / open-science-resources
A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.
open-science science neuroscience awesome awesome-list open-data open-datasets computational-science computational-neuroscience
104
ngc-learn
NACLab / ngc-learn
NGC-Learn: Neurobiological Learning and Biomimetic Systems Simulation in Python
brain-inspired-computing free-energy machine-learning neuroscience predictive-coding predictive-processing python spiking-neural-networks learning-algorithms cognitive-science local-learning computational-neuroscience neural-networks biological-neural-networks credit-assignment hebbian-learning spiking-networks jax credit-assignment-problem spike-timing-dependent-plasticity
Language:Python 104
fzenke / auryn
Auryn: A fast simulator for spiking neural networks with synaptic plasticity
simulation-framework auryn computational-neuroscience spiking-neural-networks parallel-computing stdp spiking-neu
Language:C++ 97
NSBLab / BrainEigenmodes
Code supporting 'Geometric constraints on human brain function'
modeling neuroscience brain-function brain-imaging computational-neuroscience eigenmodes fmri
Language:MATLAB 83
alfredcai / Coursera-Computational-NeuroScience
Coursera Computational-NeuroScience course of the University of Washington
coursera computational-neuroscience computational-biology
Language:Python 77
jonescompneurolab / hnn
The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.
computational-neuroscience eeg meg simulation-modeling neocortex brain biophysical neuronal-network erp alpha beta gamma pyramidal-neuron interneuron human electrophysiology data-analysis pyqt5 python
Language:Python 77
emer / leabra
Go implementation of Leabra algorithm for biologically-based models of cognition, based on emergent framework (with Python interface)
go golang neural-network cognitive-neuroscience cognitive-science computational-neuroscience artificial-intelligence artificial-neural-networks emergent
Language:Go 75
btel / python-in-neuroscience-tutorials
Collection of tutorials about methods of computational neuroscience using Python
python neuroscience computational-neuroscience scientific-computing jupyter-notebook tutorials
Language:Jupyter Notebook 72
INM-6 / multi-area-model
A large-scale spiking model of the vision-related areas of macaque cortex.
full-scale multi-area predictive-connectomics functional-connectivity theoretical-neuroanatomy simulation primates computational-neuroscience cerebral-cortex connectivity neural-network
Language:Python 71
Devrim-Celik / interactive_neuron_model_simulator
Interactive Matplotlib Plots in Python, convering Models such as the Leaky Integrate and Fire, Izhikevich Model, FitzHugh-Nagumo Model etc...
computational-neuroscience neuron-model leaky-integrate-and-fire-neuron izhikevich-neurons matplotlib
Language:Python 66
eFEL
BlueBrain / eFEL
Electrophys Feature Extraction Library
neuroscience python computational-neuroscience electrophysiology neurons
Language:Python 65
gifale95 / eeg_encoding
Use DNNs to build encoding models of EEG visual responses.
eeg human-vision deep-neural-networks things-database computational-neuroscience neural-encoding visual-object-recognition open-dataset
Language:Python 64
paninski-lab / yass
YASS: Yet Another Spike Sorter
spike-sorting computational-neuroscience python
Language:Python 62
brian-team / brian2cuda
A brian2 extension to simulate spiking neural networks on GPUs
python biological-simulations brian brian2 code-generation computational-neuroscience differential-equations gpu gpu-acceleration neuroscience science simulation simulation-framework spiking-neural-networks
Language:Python 60
XBTinChina / CCN_Association
认知计算神经联盟讨论会
cognitive-science neuroscience computational-neuroscience deep-learning neural-network
54
mschrimpf / neural-nlp
[PNAS'21] The neural architecture of language: Integrative modeling converges on predictive processing
deep-learning natural-language-processing computational-neuroscience human-language neural-recording fmri ecog
Language:Jupyter Notebook 50
rougier / CNCC-2020
Computational Neuroscience Crash Course (University of Bordeaux, 2020)
computational-neuroscience course-materials fourier-analysis linear-algebra python
Language:Jupyter Notebook 48
ContextLab / computational-neuroscience
Short undergraduate course taught at University of Pennsylvania on computational and theoretical neuroscience. Provides an introduction to programming in MATLAB, single-neuron models, ion channel models, basic neural networks, and neural decoding.
computational-neuroscience course-materials data-analysis matlab modeling neuron problem-set simulation
Language:TeX 45
syncopy
esi-neuroscience / syncopy
Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data
computational-neuroscience ecog analysis spectral-methods brain neuroscience systems-neuroscience
Language:Python 43
Orthogonal-Research-Lab / Neuromatch-Academy
Preparatory Materials, Self-guided Learning, and Project Management for Neuromatch Academy activities
education neuroscience computational-neuroscience epistemological-directory
Language:Jupyter Notebook 41
metr0jw / Spiking-Neural-Network-on-FPGA
Leaky Integrate and Fire (LIF) model implementation for FPGA
computational-neuroscience neuromorphic-computing snn spiking-neural-network spiking-neural-networks verilog verilog-hdl leaky-integrate-and-fire-model leaky-integrate-and-fire-neuron lif-model lif-neuron
Language:Verilog 39