SpikeInterface

SpikeInterface

Geek Repo

A unified framework for spike sorting. Paper at: https://elifesciences.org/articles/61834

Home Page:https://spikeinterface.readthedocs.io

Twitter:@spikeinterface

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SpikeInterface's repositories

spikeinterface

A Python-based module for creating flexible and robust spike sorting pipelines.

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spikeextractors

Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.

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spiketutorials

Tutorials for using SpikeInterface on extracellular datasets.

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spiketoolkit

Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.

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probeinterface

Python package to handle probe layout, geometry and wiring to device.

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MEArec

Fast and customizable of extracellular recordings on MEA

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spikesorters

Python-based module with spike sorter wrappers and a simple API for running them.

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spikeinterface-gui

GUI for spikeinterface objects

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spikely

A GUI for running popular spike sorting algorithms on extracellular data of any file format.

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spikemetrics

Metrics for spike sorting validation/quality control

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probeinterface_library

Collection of probe description for probeinterface

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spikeinterface-dockerfiles

Collection of spike sorters Docker files

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spikewidgets

Python-based widgets for spike sorting and electrophysiology.

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spikecomparison

Python-based modules to compare and benchmark spike sorting results.

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SpikeInterface-Hackathon-Edinburgh-May24

Repo for SpikeInterface Hackathon in Edinburgh - May24

spikeinterface-pipelines

Collection of standardized analysis pipelines based on SpikeInterface

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spikeresults

A collection of notebooks with results obtained with the help of SpikeInterface

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ndx-probeinterface

Extension for neural probes in the probeinterface format to NWB

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SpikeInterface.github.io

spikeinterface report

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hybrid_template_library

Library of templates to create hybrid data for spike sorting benchmarks

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spikefeatures

Feature extraction library for extracellular waveforms

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spikeinterface-airspeed-velocity-benchmarks

Benchmark SpikeInterface performance with Airflow

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spikeinterface-events

Material for courses, conferences, and events about SpikeInterface

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SpikeInterface-Training-Edinburgh-May24

Material for user training day of SpikeInterface

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