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The Blue Brain Project (BlueBrain)

The Blue Brain Project

BlueBrain

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Open Source Software produced and used by the Blue Brain Project

Location:Geneva, Switzerland

Home Page:https://portal.bluebrain.epfl.ch/

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The Blue Brain Project's repositories

HighFive

HighFive - Header-only C++ HDF5 interface

Language:C++License:BSL-1.0Stargazers:634Issues:25Issues:366

Brayns

Visualizer for large-scale and interactive ray-tracing of neurons

Language:C++License:LGPL-3.0Stargazers:286Issues:22Issues:90

nexus

Blue Brain Nexus - A knowledge graph for data-driven science

Language:ScalaLicense:Apache-2.0Stargazers:269Issues:27Issues:3115

NeuroM

Neuronal Morphology Analysis Tool

Language:PythonLicense:BSD-3-ClauseStargazers:96Issues:26Issues:272

eFEL

Electrophys Feature Extraction Library

Language:PythonLicense:NOASSERTIONStargazers:63Issues:17Issues:96

nmodl

Code Generation Framework For NEURON MODeling Language

Language:C++License:Apache-2.0Stargazers:46Issues:16Issues:457

NeuroTS

Topological Neuron Synthesis

Language:PythonLicense:GPL-3.0Stargazers:34Issues:8Issues:10

nexus-forge

Building and Using Knowledge Graphs made easy

Language:PythonLicense:LGPL-3.0Stargazers:34Issues:21Issues:107

MorphIO

A python and C++ library for reading and writing neuronal morphologies

Language:C++License:Apache-2.0Stargazers:26Issues:14Issues:133

Ultraliser

Reconstruction of watertight meshes and annotated volumes of neuroscience spatial structures from non-watertight inputs, segmented masks, skeletons of NGV morphologies and volumes.

Language:C++License:GPL-3.0Stargazers:24Issues:5Issues:51

snap

The Blue Brain Pythonic Simulation and Network Analysis Productivity layer

Language:PythonLicense:LGPL-3.0Stargazers:17Issues:41Issues:46

BluePyMM

Blue Brain Python Cell Model Management

Language:PythonLicense:NOASSERTIONStargazers:12Issues:13Issues:54

libsonata

A python and C++ interface to the SONATA format

Language:C++License:LGPL-3.0Stargazers:10Issues:14Issues:89

BlueCelluLab

Biologically detailed neural network simulations and analysis API

Language:PythonLicense:NOASSERTIONStargazers:8Issues:6Issues:31

spack

A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

Language:PythonLicense:NOASSERTIONStargazers:8Issues:10Issues:0

hpc-coding-conventions

Language:PythonLicense:Apache-2.0Stargazers:7Issues:14Issues:55

neurodamus

A BBP Simulation Control application for NEURON

Language:PythonLicense:Apache-2.0Stargazers:7Issues:10Issues:15

AstroVascPy

Vasculature blood flow computation and impact of astrocytic endfeet on vessels

Language:PythonLicense:Apache-2.0Stargazers:6Issues:5Issues:3

blueetl

Multiple simulations analysis tool

Language:PythonLicense:Apache-2.0Stargazers:5Issues:3Issues:0

ConnectomeUtilities

Connectome Utilities

Language:PythonLicense:Apache-2.0Stargazers:4Issues:3Issues:0

morphology-workflows

Workflows used for morphology processing.

Language:PythonLicense:Apache-2.0Stargazers:4Issues:5Issues:18

BluePyEModel

Blue Brain Python Electrical Modeling Pipeline

Language:PythonLicense:NOASSERTIONStargazers:3Issues:6Issues:3

atlas-densities

Tools to compute densities in the context of brain atlases.

Language:PythonLicense:Apache-2.0Stargazers:2Issues:39Issues:9

core-web-app

Open Brain Platform

Language:TypeScriptLicense:Apache-2.0Stargazers:2Issues:0Issues:0

sonata-extension

Language:PythonLicense:Apache-2.0Stargazers:2Issues:39Issues:7

blueetl-core

Core transformations for BlueETL

Language:PythonLicense:Apache-2.0Stargazers:1Issues:0Issues:0

libsonatareport

Language:C++License:NOASSERTIONStargazers:1Issues:5Issues:1

atlas-enhancement

Tools to generate flatmaps of brain atlases & code to add barrel and barrel column annotations to Allen Mouse CCFv3

Language:CLicense:Apache-2.0Stargazers:0Issues:0Issues:0

ngv-ctools

Language:PythonLicense:Apache-2.0Stargazers:0Issues:0Issues:0

nmodl-references

nmodl references

Language:C++Stargazers:0Issues:0Issues:0