animal-tracking
There are 2 repositories under animal-tracking topic.
- sleapLanguage:Python 388
16EAGLE / moveVis
An R package providing tools to visualize movement data (e.g. from GPS tracking) and temporal changes of environmental data (e.g. from remote sensing) by creating video animations.
Language:R 126gwjensen / SnakeStrike
A Low-cost Open-source High-speed Multi-camera Motion Capture System.
Language:C++ 88- ciatah
bahanonu / ciatah
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
Language:MATLAB 81 - Language:HTML 36
- Language:R 29
rjdmoore / fictrac
FicTrac: A webcam-based method for tracking spherical motion and generating fictive animal paths.
Language:C++ 24inbo / bird-tracking
🛰🐦 Bird tracking - GPS tracking network for large birds
Language:R 18sollan / alma
Fully automated (rodent) limb motion analysis toolbox for behavioral analysis with bodypart coordinate data, building upon markerless pose estimation.
Language:Python 12- Language:Python 9
- Dead-reckoning-animal-movements-in-R
Richard6195 / Dead-reckoning-animal-movements-in-R
R functions to dead-reckon reckon animal movement from raw motion sensor data
Language:R 7 - Language:C++ 6
- Language:R 5
Acoustic telemetry data 🔊🐟
Language:R 5MeysamAmirsardari / PoseModel
PoseModel: An Open-Source Toolkit for Accurate and Robust Automated Behavioral Latent Embedding
Language:Jupyter Notebook 4- Language:R 4
pratikunterwegs / atlastools
Tools for pre-processing high-throughput animal tracking data.
Language:R 4abfleishman / trakR
R package for basic data processing for spatial animal tracking data
Language:R 3amurto / jeev-rakshak
Wildlife Species Identification using TensorFlow.js
Language:CSS 3- matosLanguage:R 3
- Language:R 3
michaelrauscher / flyalyzer
Flyalyzer fruit fly kinematics tracker for matlab
Language:MATLAB 3peterloes / RFID-MS
Nest-box visit monitoring system. Mainboard for animal observation over (RFID) pit tagging numbers and light barriers.
Language:C 3alknemeyer / EEE4022S-Thesis-Project
Animal tracking using machine learning with limited computational power
Language:TeX 2Feeder monitoring system. Mainboard to Observe and Manipulate Organisms (animals) over (RFID) pit tagging numbers and lightbarriers.
Language:C 2🦅 R package to annotate GPS tracking data of gulls
Language:R 1Analysis of migration patterns of western marsh harriers using GPS tracking data for Vansteelant et al. (2020)
Language:R 1nmercadeb / Computational-Biophysics-project
Codes for the final project of the subject Computational Biophysics of the degree Engineering Physics (UPC). By Marta Alcalde i Núria Mercadé.
Language:Jupyter Notebook 1A standalone platform for animal manipulation (with MOMO) and observation (with RFID-MS). Light barriers fall into a category of equipment known as presence detection devices.
Language:C 1red-g / animal-ranges
Utilities for calculating and displaying the range of an animal based on its location data. Includes an optional airtag-based animal tracking setup.
Language:Julia 1roaldarbol / AniScope
A modular ethoscope for customised behavioural experiments with tiny animals.
Language:G-code 1rvitorgomes / labvision
Barnes Maze OpenCV Tool
Language:Python 1beckypadget / SANDCAT
Work-in-progress pipeline for using Segment Anything for animal tracking
Language:Jupyter Notebook 0R package to serve data from the European Tracking Network over a restful api
Language:R 0LilBabines / Open-Field-Analysis
6 month, Intern-ship projet.
Language:Python 0allipski / fauna-back
Animal monitoring software for NGOs, with sophisticated database manipulation
Language:TypeScript
