tumor-segmentation

There are 1 repository under tumor-segmentation topic.

MrGiovanni / SyntheticTumors
[CVPR 2023] Label-Free Liver Tumor Segmentation
data-synthesis label-free segmentation tumor-segmentation unet
Language:Python 265
sdsubhajitdas / Brain-Tumor-Segmentation
Brain Tumor Segmentation done using U-Net Architecture.
brain-tumor-segmentation deep-learning image-segmentation pytorch tumor-segmentation unet unet-image-segmentation unet-pytorch
Language:Jupyter Notebook 248
himashi92 / VT-UNet
[MICCAI2022] This is an official PyTorch implementation for A Robust Volumetric Transformer for Accurate 3D Tumor Segmentation
3d-medical-imaging-segmentation brats-dataset deep-learning mri pure-transformer pytorch pytorch-implementation segmentation semantic-segmentation transformer tumor-segmentation vision-transformer volumetric-transformer vtunet
Language:Python 225
MarvinLer / tcga_segmentation
Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024
multiple-instance-learning image-segmentation histopathology tumor-segmentation whole-slide-imaging wsi miccai tcga slide-image-segmentation tcga-data weakly-supervised-learning pathology computational-pathology data-efficient medical-imaging segmentation
Language:Python 111
junqiangchen / BraTS18-Challege
Multimodal Brain Tumor Segmentation Challenge 2018
tumor-segmentation mri mutilmodel vnet tensorflow
Language:Python 50
MrGiovanni / ContinualLearning
[MICCAI 2023] Continual Learning for Abdominal Multi-Organ and Tumor Segmentation
continual-learning organ-segmentation tumor-segmentation
Language:Python 46
chaineypung / CCFBDCI-2021-Ultrasonic-Tumor-Segmentation-Rank1st
This is the source code of the 1st place solution for segmentation task (with Dice 90.32%) in 2021 CCF BDCI challenge.
deep-neural-networks hemangioma medical-imaging pytorch tumor-segmentation ultrasound-imaging
Language:Python 33
adityajn105 / brain-tumor-segmentation-unet
Implementation of U-Net from paper "U-Net: Convolutional Networks for Biomedical Image Segmentation" to segment tumor in given MRI images.
mri-images tumor-segmentation image-segmentation dice-loss unet-image-segmentation unet keras
Language:Jupyter Notebook 28
Alxaline / BraTS21
Solution of the RSNA/ASNR/MICCAI Brain Tumor Segmentation (BraTS) Challenge 2021
brain-tumor-segmentation brats-challenge brats2021 deep-learning medical-imaging pytorch tumor-segmentation unet brats
Language:Python 16
parhambt / MRI-brain-tumor-detection
tumor detection and segmentation with brain MRI with CNN and U-net algorithm
ai cnn computer-vision convolutional-neural-network ml neural-network u-net brain-tumor-detection brain-tumor-segmentation medical-image-processing tumor-detection tumor-segmentation brain-tumor-classification cancer-detection brain-tumor convolutional-neural-networks deep-neural-networks medical-image-analysis medical-image-computing medical-image-detection
Language:Jupyter Notebook 16
abeermohamed1 / Image-Processing
Image Processing and Computer Vision tasks using OpenCV Python: motion tracking, face detection, tumor segmentation
image-processing computer-vision opencv-python motion-tracking active-contour tumor-segmentation segmentation face-detection haar-cascade
Language:Python 14
mahdizynali / Pytorch-UNet-Brain-Tumor-Detection
simple pytorch unet model for brain tumor detection on MRI tiff images
brain machine-learning neural-network pytorch tumor-detection tumor-segmentation unet unet-pytorch opencv4 python3
Language:Python 12
Pramod04121999 / Pipelined-Tumor-Segmentation
A complete pipelined automatic process for skull stripping and tumor segmentation from Brain MRI using Thresholding.
thresholding-algorithm skull-stripping tumor-segmentation brain-mri image-analysis
Language:MATLAB 12
ches-001 / Binary-Segmentation-Network-for-Tumor-Detection-in-MRIs
An approach to tumor detection and segmentation via encoder decoder artificial neural network architecture
artificial-neural-network binary-segmentation computer-vision-algorithm semantic-segmentation tumor-segmentation
Language:Jupyter Notebook 10
thavlik / machine-learning-portfolio
Assorted machine learning implementations for medical data.
deep-learning machine-learning vae fmri mri reinforcement-learning gan medical computed-tomography neuroscience eeg electroencephalography functional-mri computer-vision hemorrhage-detection medicine neurology radiology tumor-segmentation magnetic-resonance-imaging
Language:Python 10
AHMEDSANA / Binary-Class-Brain-Tumor-Segmentation-Using-UNET
We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for our segmentation.
brain brain-tumor-classification brain-tumor-detection brain-tumor-segmentation brats-dataset brats18 brats2018 keras pandas segmentation tensorflow tumor-detection tumor-segmentation u-net u-net-keras python python3 nueral-networks deep-learning
Language:Jupyter Notebook 7
GianlucaPorcelli / MRI_toumor_segmentation
The work presented explains how to segment the brain tumour area in absence of interaction with user basing his technique on a saliency map constructed from three different resonance techniques.
mri-images tumor tumor-segmentation gbm glioblastoma matlab saliency saliency-map salience pseudocolor adaptive threshold thresholding superpixels superpixel-segmentation
Language:MATLAB 7
PathologyDataScience / MuTILs_Panoptic
Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs model and PanopTILs dataset. medRxiv 2022.01.08.22268814.
computational-pathology convolutional-neural-networks deep-learning digital-pathology explainable-ai tumor-infiltrating-lymphocytes tumor-segmentation breast-cancer
Language:Python 7
MungoMeng / Survival-AdaMSS
AdaMSS: Adaptive Multi-Modality Segmentation-to-Survival Learning for Survival Outcome Prediction
deep-learning survival-prediction tumor-segmentation
Language:Python 6
neuronets / ams
Automated meningioma segmentation
segmentation trained-models tensorflow neuroimaging mri tumor tumor-segmentation
Language:Python 6
javaidiqbal11 / Automatic-Brain-Tumor-Segmentation-Python
A model build for the brain tumor segmentation using Brain MRI.
tumor-segmentation brain mri-images
Language:Python 4
Optimized-U-Net
miladsade96 / Optimized-U-Net
Optimized U-Net for Brain Tumor Segmentation
python python3 cv computer-vision deep-learning deep-neural-networks unet tumor-segmentation brats brain-tumor-segmentation
Language:Python 4
aysekonus / BrainTumorSegmentation
"Derin Öğrenme Teknolojisi ile Beyin Tümörü Tespiti ve Segmentasyonu" konusu ele alınmış olup, tümörü kolaylıkla ve yüksek doğrulukta tespit edebilen bir bilgisayar destekli tümör tespit sistemi geliştirilmiştir.
brain brain-tumor brain-tumor-segmentation deep-learning deep-neural-networks derin-ogrenme mask-rcnn resnet resnet-101 t tumor tumor-detection tumor-segmentation
Language:Jupyter Notebook 3
mahdizynali / BraTS2020-Tensorflow-Brain-Tumor-Segmentation
implementation of Tensorflow Unet brain tumor segmentation and detection enhanced with attention model on nii datasets
attention-model brain detection neural-network segmentation tensorflow tensorflow2 tumor-detection tumor-segmentation unet unet-image-segmentation machine-learning opencv
Language:Python 3
morteza89 / Brain-Tumor-Segmentation
In this project I'm going to segment Tumor in MRI brain Images with a UNET which is based on Keras. The dataset is available online on Kaggle, and the algorithm provided 99% accuracy with a validation loss of 0.11 in just 10 epochs.
machine-learning deep-learning unet-image-segmentation mri-segmentation tumor-segmentation unet cnn-keras lgg-mri-segmentation image-segmentation python segmentation kaggle medical-imaging
Language:Python 3
RichardObi / pre_post_synthesis
Official repository for "Pre- to Post-Contrast Breast MRI Synthesis for Enhanced Tumour Segmentation"
breast-cancer dce-mri generative-adversarial-network generative-ai image-synthesis mri nnunet pix2pixhd segmentation synthetic-data magnetic-resonance-imaging tumor-segmentation
Language:Python 3
Thomas-JHR / Biomedical-Image-and-Signal-Processing
Introduction for biomedical image and signal processing
biomedical-image-processing ecg-qrs-detection ecg-signal image-processing tumor-segmentation
Language:MATLAB 3
AHMEDSANA / Four-class-Brain-tumor-segmentation.
We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for training our dataset.
python python3 brain-tumor-detection brain-tumor-segmentation braintumorsegmentation brats brats-dataset brats2018 deep-learning mri-images mri-segmentation tensorflow tumor-segmentation unet-image-segmentation unet-keras unet-segmentation
Language:Python 2
ajulyav / FederatedLearning_Demo
PROOF OF CONCEPT OF THE FEDERATED LEARNING PLATFORM
federated-learning nvidia-clara nvidiaflare tumor-segmentation
2
artorg-unibe-ch / qam
Library to compute 3D surface-distances for evaluating liver ablation/tumor completeness based on segmentation images.
segmentation liver-disease tumor-segmentation segmentation-evaluation surface-distances medical-image-analysis euclidean-distances radiomics 3d-surface-distances ablation
Language:Python 2
ddayzzz / clara_demo
Some codes based on NVIDIA Clara SDK
clara federated-learning tumor-segmentation brats-dataset
Language:Jupyter Notebook 2
GaganHeer / mri-python-processing
Digital Images Processing and Segmentation for Brain Tumor MRI
python image-processing tumor-segmentation machine-learning 3d-images tensorflow keras
Language:HTML 2
Elanchezhian2712 / Brain-Tumor-Detection
🧠 Brain-Tumor-Detection 📷 is a project that uses machine learning and computer vision techniques to automatically detect brain tumors from MRI images. 🔍🤖
artificial-intelligence brain-computer-interface brain-tumor-detection computer-vision data-science deep-learning healthcare-technology image-processing image-recognition machine-learning medical-imaging mri-analysis tumor-segmentation
Language:Python 1
lxaw / mamba-tumor-seg
Segmentation of cancerous tumors using Mamba. Video / paper to be provided in future.
image-segmentation mamba mamba-image mamba-image-segmentation mamba-segment segment segmentation tumor-segmentation u-mamba u-net u-net-pytorch
Language:Jupyter Notebook 1
saba99 / Kidney_Tissue_Segmentation
Kidney Tumor Segmentation
image-segmentation kidney-segmentation medical-imaging u-net kits-23 challenge convolutional-neural-networks deep-learning medical-image-segmentation tumor-segmentation
Language:Jupyter Notebook 1
Skygers / Multiclass-U-Net-for-liver-tumor-segmentation
Liver Tumor Detection using Multiclass Semantic Segmentation with U-Net Model Architecture. CT-Scan images processed with Window Leveling and Window Blending Method, also CT-Scan Mask processed with One Hot Semantic Segmentation (OHESS)
cv2 liver-segmentation multiclass-segmentation one-hot one-hot-encoding pyhton3 semantic-segmentation tensorflow2 tumor-segmentation
Language:Jupyter Notebook 1

tumor-segmentation

MrGiovanni / SyntheticTumors

sdsubhajitdas / Brain-Tumor-Segmentation

himashi92 / VT-UNet

MarvinLer / tcga_segmentation

junqiangchen / BraTS18-Challege

MrGiovanni / ContinualLearning

chaineypung / CCFBDCI-2021-Ultrasonic-Tumor-Segmentation-Rank1st

adityajn105 / brain-tumor-segmentation-unet

Alxaline / BraTS21

parhambt / MRI-brain-tumor-detection

abeermohamed1 / Image-Processing

mahdizynali / Pytorch-UNet-Brain-Tumor-Detection

Pramod04121999 / Pipelined-Tumor-Segmentation

ches-001 / Binary-Segmentation-Network-for-Tumor-Detection-in-MRIs

thavlik / machine-learning-portfolio

AHMEDSANA / Binary-Class-Brain-Tumor-Segmentation-Using-UNET

GianlucaPorcelli / MRI_toumor_segmentation

PathologyDataScience / MuTILs_Panoptic

MungoMeng / Survival-AdaMSS

neuronets / ams

javaidiqbal11 / Automatic-Brain-Tumor-Segmentation-Python

miladsade96 / Optimized-U-Net

aysekonus / BrainTumorSegmentation

mahdizynali / BraTS2020-Tensorflow-Brain-Tumor-Segmentation

morteza89 / Brain-Tumor-Segmentation

RichardObi / pre_post_synthesis

Thomas-JHR / Biomedical-Image-and-Signal-Processing

AHMEDSANA / Four-class-Brain-tumor-segmentation.

ajulyav / FederatedLearning_Demo

artorg-unibe-ch / qam

ddayzzz / clara_demo

GaganHeer / mri-python-processing

Elanchezhian2712 / Brain-Tumor-Detection

lxaw / mamba-tumor-seg

saba99 / Kidney_Tissue_Segmentation

Skygers / Multiclass-U-Net-for-liver-tumor-segmentation