There are 47 repositories under medical-image-segmentation topic.
Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Matting, 3D Segmentation, etc.
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
A collection of resources on applications of Transformers in Medical Imaging.
A contrastive learning based semi-supervised segmentation network for medical image segmentation
BCDU-Net : Medical Image Segmentation
Official Pytorch Code base for "UNeXt: MLP-based Rapid Medical Image Segmentation Network", MICCAI 2022
PraNet: Parallel Reverse Attention Network for Polyp Segmentation, MICCAI 2020 (Oral). Code using Jittor Framework is available.
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
This repo provides the official code for : 1) TransBTS: Multimodal Brain Tumor Segmentation Using Transformer (https://arxiv.org/abs/2103.04430) , accepted by MICCAI2021. 2) TransBTSV2: Towards Better and More Efficient Volumetric Segmentation of Medical Images(https://arxiv.org/abs/2201.12785).
Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI
CFPNet-M: A Light-Weight Encoder-Decoder Based Network for Multimodal Biomedical Image Real-Time Segmentation
A PyTorch framework for medical image segmentation
Official repo for Medical Image Segmentation Review: The success of U-Net
The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations), up until April 2023.
Official code for ResUNetplusplus for medical image segmentation (TensorFlow & Pytorch implementation)
This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
Top 10 brats 2020 Solution
This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.
[MedIA Journal] An ultimately comprehensive paper list of Vision Transformer/Attention, including papers, codes, and related websites
Unofficial code base for UNETR: Transformers for 3D Medical Image Segmentation
[ICCV 2023] A curated list of resources on implicit neural representations in Medical Imaging
Usage of Multi-task deep learning network for semantic segmentation in medical images
The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations) to date.
HiFormer: Hierarchical Multi-scale Representations Using Transformers for Medical Image Segmentation (WACV 2023)
PyTorch implementation of OrganSegRSTN - CVPR 2018
We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.
a metric library for Medical Image Segmentation EVALuation