brats-dataset

There are 4 repositories under brats-dataset topic.

himashi92 / VT-UNet
[MICCAI2022] This is an official PyTorch implementation for A Robust Volumetric Transformer for Accurate 3D Tumor Segmentation
transformer 3d-medical-imaging-segmentation tumor-segmentation volumetric-transformer deep-learning pytorch-implementation pure-transformer pytorch segmentation mri vision-transformer vtunet semantic-segmentation brats-dataset
Language:Python 230
shalabh147 / Brain-Tumor-Segmentation-and-Survival-Prediction-using-Deep-Neural-Networks
Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation and using segmented image features for Survival Prediction of patients through deep neural networks.
brain-tumor-segmentation survival-prediction deep-neural-networks unet-architecture segmentation keras-tensorflow brats-dataset medical-imaging aiformedicine vnet3d unet-3d survival-models glioma mri-segmentation deep-learning cnn-segmentation dice-scores dice-coefficient dice-loss
Language:Jupyter Notebook 156
LightersWang / 3DUNet-BraTS-PyTorch
PyTorch 3D U-Net implementation for Multimodal Brain Tumor Segmentation (BraTS 2021)
pytorch segmentation mri-segmentation unet brats-challenge brats-dataset brats2021 brain-tumor-segmentation brain-tumors semantic-segmentation
Language:Python 52
HowieMa / lstm_multi_modal_UNet
[ICIVC 2019] "LSTM multi-modal UNet for Brain Tumor Segmentation"
brats-dataset lstm-cnn medical-imaging multi-modal-imaging unet-pytorch
Language:Python 51
charan223 / Brain-Tumor-Segmentation-using-Topological-Loss
A Tensorflow Implementation of Brain Tumor Segmentation using Topological Loss
brain-tumor-segmentation segmentation niftynet tensorflow losses brats-dataset brats image-segmentation deep-learning topology-validation topology fcn cnn 3d-segmentation
Language:Python 30
adhaka3 / Pyadiomics-based-glioma-grading
This is a complete guide on how to do Pyradiomics based feature extraction and then, build a model to calculate the grade of glioma.
radiomics-feature-extraction pyradiomics image-fusion brats-dataset brats2018 random-forest xgboost logistic-regression pca mrmr k-best-first relief
Language:Jupyter Notebook 23
mahsaama / ViT3D-BrainTumorSegmentation
Segmentation of Brain Tumors using Vision Transformer
3d attention-is-all-you-need brain-tumor-segmentation brats-dataset swin-transformer transformers
Language:Python 15
Jun-Jie-Shi / M2FTrans
[IEEE-JBHI'2023] M2FTrans: Modality-Masked Fusion Transformer for Incomplete Multi-Modality Brain Tumor Segmentation
brats-dataset medical-image-segmentation missing-modalities pytorch-implementation transformer
Language:Python 10
blackbird71SR / Brain-Segmentation-and-Tumor-Detection
Modified VGG16 and UNetCNN based 4D Image Segmentation (Finalist - Smart India Hackathon 2019)
image-segmentation unet deep-learning convolutional-neural-networks python vgg16 brats-dataset brats-challenge gui django mrbrains18 image-classification medical-imaging
Language:Python 9
PatrickSVM / Diffusion-Models-for-Brain-Tumor-MRI-Scans
Training of Noise-to-Image Diffusion Model on Multi-Channel Brain Tumor MRI Scans.
brats-dataset brats2020 diffusion-models image-generation
Language:Jupyter Notebook 9
HowieMa / BrainTumorSegmentation
Brain tumor segmentation for Brats15 datasets
3d-u brats-dataset segmentation unet
Language:Python 8
tpopordanoska / calibration_and_bias
Codebase for "On the relationship between calibrated predictors and unbiased volume estimation" (MICCAI 2021).
bias brats-dataset calibration deep-learning medical-imaging miccai-2021 volume-estimation
Language:Python 8
AHMEDSANA / Binary-Class-Brain-Tumor-Segmentation-Using-UNET
We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for our segmentation.
brain brain-tumor-classification brain-tumor-detection brain-tumor-segmentation brats-dataset brats18 brats2018 keras pandas segmentation tensorflow tumor-detection tumor-segmentation u-net u-net-keras python python3 nueral-networks deep-learning
Language:Jupyter Notebook 7
FinnBehrendt / Conditioned-Diffusion-Models-UAD
Codebase for Conditioned Diffusion Models for Unsupervised Anomaly Detection
anomaly-detection brats-dataset deep-learning diffusion-models domain-adaptation mri-brain unsupervised-anomaly-detection unsupervised-learning conditioned-diffusion-models
Language:Python 6
Dynamo13 / AW-Net
[ICCVw 2023] "AW-Net: A Novel Fully Connected Attention-based Medical Image Segmentation Model" by Debojyoti Pal, Tanushree Meena, Dwarikanath Mahapatra, and Sudipta Roy.
brats-dataset computer-vision iccv2023 medical-imaging multimodal-deep-learning rsna segmentation-models tensorflow iccv
Language:Python 3
AHMEDSANA / Four-class-Brain-tumor-segmentation.
We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for training our dataset.
python python3 brain-tumor-detection brain-tumor-segmentation braintumorsegmentation brats brats-dataset brats2018 deep-learning mri-images mri-segmentation tensorflow tumor-segmentation unet-image-segmentation unet-keras unet-segmentation
Language:Python 2
cviaai / IGS
Iterative gradient sampling
gradients deep-learning brats-dataset acdc undersampling
Language:Jupyter Notebook 2
ddayzzz / clara_demo
Some codes based on NVIDIA Clara SDK
clara federated-learning tumor-segmentation brats-dataset
Language:Jupyter Notebook 2
afiliot / BRATS-preprocessing
Reproduce BRATS preprocessing for a given patient (needed: 4 modalities T1, T2, T1c and FLAIR, optional: segmentation).
brats18 brats-dataset fsl ants
Language:Shell 1
harshgarg28 / Brain-Tumor-Segmentation
discusses deep learning models for segmenting MRI images, specifically the UNET model for Brain Tumor Segmentation
attention-mechanism brats-challenge brats-dataset brats2020 unet-image-segmentation unet-keras unet-model unet-segmentation
Language:Python 1
sandeshkatakam / NeuralODEs-for-BraTS
NeuralODEs for Brain Tumor Segmentation. Implementation of Neural ODE for Glioma Segmentation Paper on BraTS 2020 Dataset
brats-dataset neural-odes pytorch pytorch-implementation semantic-segmentation
Language:Jupyter Notebook 1
ironghost007 / Glioblastoma-tumour-classification-and-segmentation
Glioblastoma tumour classfication and tumour grade segmentattion using U-NET CNN
brain-tumor-segmentation brain-tumour-detection classification machine-learning python unet-image-segmentation glioblastoma tumour brats-dataset pca-analysis random-forest xgboost
Language:Jupyter Notebook 0
ynes99 / BraTS_Segmentation
Segmentation of brain tumors (Glioma) in MRIs using Meta's model SAM (Segment anything model)
brats brats-dataset deep-learning image-segmentation medical-imaging neural-networks sam segment-anything-model segmentation transformers trans-u-net
Language:Jupyter Notebook 0

brats-dataset

himashi92 / VT-UNet

shalabh147 / Brain-Tumor-Segmentation-and-Survival-Prediction-using-Deep-Neural-Networks

LightersWang / 3DUNet-BraTS-PyTorch

HowieMa / lstm_multi_modal_UNet

charan223 / Brain-Tumor-Segmentation-using-Topological-Loss

adhaka3 / Pyadiomics-based-glioma-grading

mahsaama / ViT3D-BrainTumorSegmentation

Jun-Jie-Shi / M2FTrans

blackbird71SR / Brain-Segmentation-and-Tumor-Detection

PatrickSVM / Diffusion-Models-for-Brain-Tumor-MRI-Scans

HowieMa / BrainTumorSegmentation

tpopordanoska / calibration_and_bias

AHMEDSANA / Binary-Class-Brain-Tumor-Segmentation-Using-UNET

FinnBehrendt / Conditioned-Diffusion-Models-UAD

Dynamo13 / AW-Net

AHMEDSANA / Four-class-Brain-tumor-segmentation.

cviaai / IGS

ddayzzz / clara_demo

afiliot / BRATS-preprocessing

harshgarg28 / Brain-Tumor-Segmentation

sandeshkatakam / NeuralODEs-for-BraTS

ironghost007 / Glioblastoma-tumour-classification-and-segmentation

ynes99 / BraTS_Segmentation