radiology

There are 11 repositories under radiology topic.

MIT-LCP / mimic-cxr
Code, documentation, and discussion around the MIMIC-CXR database
mimic-cxr physionet radiology
Language:Jupyter Notebook 238
delira-dev / delira
Lightweight framework for fast prototyping and training deep neural networks with PyTorch and TensorFlow
deep-learning delira machine-learning medical-images medical-imaging pytorch radiology tensorflow
Language:Python 222
abachaa / Existing-Medical-QA-Datasets
Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems
medical-qa-datasets qa question-answering nlp bionlp medical-qa medical-informatics vqa computer-vision datasets consumer-health-questions radiology
202
GavriloviciEduard / Asclepios-DICOM-Viewer
Bachelor thesis project. A DICOM Viewer written in C++, QT and VTK.
dicom-viewer vtk bachelor-thesis cpp17 cpp dicom medical-imaging medical-image-processing medical qt5 qt 2d 3d radiology nuclear-medicine dcmtk viewer
Language:C++ 186
jrzech / reproduce-chexnet
Reproduce CheXNet
binder-ready computer-vision convolutional-neural-networks deep-learning pytorch radiology
Language:Jupyter Notebook 185
Evil-DICOM
rexcardan / Evil-DICOM
A C# DICOM Library
dicom medical-physics radiation-oncology radiology
Language:C# 165
razorx89 / roco-dataset
Radiology Objects in COntext (ROCO): A Multimodal Image Dataset
cuis dataset image-retrieval medical radiology semantic-types umls
Language:Python 155
starviewer-medical / starviewer
Starviewer, a cross-platform open source medical imaging software
cpp medical-imaging gplv3 qt vtk itk gdcm dcmtk sqlite multi-platform dicom pacs 2d 3d radiology nuclear-medicine medical mhd viewer c-plus-plus
Language:C++ 129
RichardObi / medigan
medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis
medical generation gans toolbox python deep-learning machine-learning computer-vision dataset endoscopy generative-adversarial-network generative-ai generative-model medical-image-analysis medical-image-dataset medical-imaging radiology synthesis synthetic-data magnetic-resonance-imaging
Language:Python 113
ttanida / rgrg
Code for the CVPR paper "Interactive and Explainable Region-guided Radiology Report Generation"
deep-learning medical-imaging natural-language-generation object-detection radiology
Language:Python 109
AiAiHealthcare / ProjectAiAi
AiAi.care project is teaching computers to "see" chest X-rays and interpret them how a human Radiologist would. We are using 700,000 Chest X-Rays + Deep Learning to build an FDA 💊 approved, open-source screening tool for Tuberculosis and Lung Cancer. After an MRMC clinical trial, AiAi CAD will be distributed for free to emerging nations, charitable hospitals, and organizations like WHO 🌏 We will also release our pretrained models and weights as Medical Imagenet.
pytorch deep-learning scikit-image radiology cxr-lungs x-ray postero-anterior ct-scans lung-cancer-detection tuberculosis lung-cancer teleradiology charity fda keras tensorflow radiologist convolutional-neural-networks dicom
Language:Dockerfile 101
Project-MONAI / monai-deploy
MONAI Deploy aims to become the de-facto standard for developing, packaging, testing, deploying and running medical AI applications in clinical production.
monai ai medical-imaging inference healthcare guidelines open-standard ai-application-development ai-application-deployment deep-learning machine-learning mlops ml-platform pytorch python dicom fhir radiology pathology
Language:Shell 95
stanfordmlgroup / CheXbert
Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERT
deep-learning medical-imaging bert natural-language-processing radiology
Language:Python 90
mr7495 / COVID-CTset
Large Covid-19 CT scans dataset from the paper: https://doi.org/10.1016/j.bspc.2021.102588
covid-19 covid19 coro dataset covid19-data deep-learning ct-scan-images ct-scan radiology covid-ctset covid-dataset covid-data ctscan-daraset covid19-dataset
Language:Python 89
NISYSLAB / Emory-BMI-GSoC
Emory BMI GSoC Project Ideas
visualization data-science workflows radiology service-oriented-architecture dicom radiology-imaging front-end closed-loop-control neuromodulation neuroscience workflow
87
Emory-HITI / Niffler
Niffler: A DICOM Framework for Machine Learning and Processing Pipelines.
machine-learning dicom scanners scanner-utilization pacs pacs-client pacs-connector dicom-server anonymization anonymisation dicom2png workflows radiology radiology-imaging
Language:Python 85
jeremykohn / rid-covid
Image-based COVID-19 diagnosis. Links to software, data, and other resources.
artificial-intelligence chest-ct chest-xray coronavirus covid covid-19 covid19 ct-scans data dataset deep-learning detector diagnosis images machine-learning medical neural-networks radiology research xray
78
yuhaozhang / summarize-radiology-findings
Code and pretrained model for paper "Learning to Summarize Radiology Findings"
nlp natural-language-processing summarization radiology medical-natural-language-processing medical-informatics medicine
Language:Python 78
abachaa / VQA-Med-2019
Visual Question Answering in the Medical Domain VQA-Med 2019
vqa vqa-dataset medical-imaging radiology nlp imageclef vqa-med
75
pyaf / DenseNet-MURA-PyTorch
Implementation of DenseNet model on Standford's MURA dataset using PyTorch
densenet mura-dataset radiology pytorch standford-ml-group exploratory-data-analysis
Language:Python 75
Oulu-IMEDS / OAProgression
Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data
osteoarthritis pytorch disease-progression reproducible-research deep-learning medicine radiology clinical-data clinical-decision-support
Language:Python 73
omar-mohamed / GPT2-Chest-X-Ray-Report-Generation
This is the implementation of the CDGPT2 model mentioned in our paper 'Automated Radiology Report Generation using Conditioned Transformers'
deep-learning transformer gpt2 transfer-learning medical-imaging chest-xrays report-generation radiology
Language:Python 66
Oulu-IMEDS / DeepKnee
Codes for paper: Automatic Knee Osteoarthritis Diagnosis from Plain Radiographs: A Deep Learning-Based Approach
medical deep-learning pytorch knee biomedical-engineering osteoarthritis radiology radiographs attention-maps
Language:Python 63
mr7495 / COVID-CT-Code
Fully automated code for Covid-19 detection from CT scans from paper: https://doi.org/10.1016/j.bspc.2021.102588
deep-learning deep-neural-networks convolutional-neural-networks computer-vision covid-19 covid19-data ct-scans radiology automated-machine-learning covid-ct ct-scan-images covid-dataset ctscan-dataset
Language:Jupyter Notebook 61
JuliaHealth / DICOM.jl
Julia package for reading and writing DICOM (Digital Imaging and Communications in Medicine) files
dicm dicm-files dicom dicom-files digital images imaging julia julia-language medical pacs radiology
Language:Julia 55
ajsanjoaquin / COVID-19-Scanner
This model is meant to help triage patients (prioritize certain patients for testing, quarantine, and medical attention) that require diagnosis for COVID-19. This model is not meant to diagnose COVID-19.
covid-19 computer-vision cnn-classification neural-network healthcare detection-model radiology
Language:CSS 52
nadeemlab / Physics-ArX
Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]
deep-learning physics-simulation data-augmentation computed-tomography cone-beam-ct radiotherapy radiology artifacts-generation motion-simulation
Language:Python 50
openmrs / openmrs-module-radiology
:hospital: OpenMRS Radiology Module
openmrs radiology java healthcare
Language:Java 45
ml-workgroup / covid-19-image-repository
Anonymized dataset of COVID-19 cases with a focus on radiological imaging. This includes images (x-ray / ct) with extensive metadata, such as admission-, ICU-, laboratory-, and patient master-data.
corona coronavirus covid-19 covid-data covid19 covid19-data dataset laboratory laboratory-data radiology x-ray xray
Language:Python 43
rachellea / ct-volume-preprocessing
End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Machine-Learning-Based Multiple Abnormality Prediction with Large-Scale Chest Computed Tomography Volumes."
python dicom data-science preprocessing radiology ct-scans numpy volumetric medical-image-processing
Language:Python 43
Borda / kaggle_vol-3D-classify
Predict the status of a genetic biomarker important for brain cancer treatment
3d brain radiology image-classification
Language:Jupyter Notebook 37
mida-project / eye-tracker-setup
:eyes: Tobii Eye Tracker 4C Setup
eye-tracking eye-detection eye-tracker tobii tobii-eye-tracker medical-imaging breast-cancer radiology radiologist doctor physician clinician clinicians human-computer-interaction
Language:Python 37
SaravananSubramanian / dicom
This repository contains all the code that I have used in my DICOM articles on my blog (Java examples are included)
dicom dicom-standard healthcare imaging-informatics radiology java
Language:Java 36
imonban / RadiologyReportEmbedding
Intelligent Word Embeddings of Free-Text Radiology Reports
radiology-information radiology word2vec-model embeddings nlp-machine-learning
23
SaravananSubramanian / dicomdotnet
This repository contains source code used in the DICOM programming using .NET/C# Tutorials
dicom dicom-standard imaging imaging-informatics radiology dotnet
Language:C# 23
zzxslp / WCL
Code for Weakly Supervised Contrastive Learning for Chest X-Ray Report Generation (EMNLP-21)
pytorch deep-learning healthcare-application image-captioning medical radiology
Language:Python 23

radiology

MIT-LCP / mimic-cxr

delira-dev / delira

abachaa / Existing-Medical-QA-Datasets

GavriloviciEduard / Asclepios-DICOM-Viewer

jrzech / reproduce-chexnet

rexcardan / Evil-DICOM

razorx89 / roco-dataset

starviewer-medical / starviewer

RichardObi / medigan

ttanida / rgrg

AiAiHealthcare / ProjectAiAi

Project-MONAI / monai-deploy

stanfordmlgroup / CheXbert

mr7495 / COVID-CTset

NISYSLAB / Emory-BMI-GSoC

Emory-HITI / Niffler

jeremykohn / rid-covid

yuhaozhang / summarize-radiology-findings

abachaa / VQA-Med-2019

pyaf / DenseNet-MURA-PyTorch

Oulu-IMEDS / OAProgression

omar-mohamed / GPT2-Chest-X-Ray-Report-Generation

Oulu-IMEDS / DeepKnee

mr7495 / COVID-CT-Code

JuliaHealth / DICOM.jl

ajsanjoaquin / COVID-19-Scanner

nadeemlab / Physics-ArX

openmrs / openmrs-module-radiology

ml-workgroup / covid-19-image-repository

rachellea / ct-volume-preprocessing

Borda / kaggle_vol-3D-classify

mida-project / eye-tracker-setup

SaravananSubramanian / dicom

imonban / RadiologyReportEmbedding

SaravananSubramanian / dicomdotnet

zzxslp / WCL