brain-mri

There are 5 repositories under brain-mri topic.

nilearn / nilearn
Machine learning for NeuroImaging in Python
brain-connectivity brain-imaging brain-mri decoding fmri machine-learning mvpa neuroimaging python
Language:Python 1129
arnab39 / FewShot_GAN-Unet3D
Tensorflow implementation of our paper: Few-shot 3D Multi-modal Medical Image Segmentation using Generative Adversarial Learning
few-shot-learning brain-mri semi-supervised-learning unet-3d unet-tensorflow gans semi-supervised-gan multi-modal-imaging medical-image-analysis iseg-challenge weightnorm-3d 3d-gan image-segmentation tensorflow convolutional-neural-networks
Language:Python 372
NYUMedML / CNN_design_for_AD
Code for "Generalizable deep learning model for early Alzheimer’s disease detection from structural MRIs"
convolutional-neural-networks alzheimer-disease clinical-data medical-imaging mri deep-learning artificial-intelligence dementia mild-cognitive-impairment brain-mri
Language:Jupyter Notebook 132
iitzco / deepbrain
Deep Learning tools for brain medical images
deep-learning medical-imaging artificial-intelligence brain-mri tensorflow neural-networks machine-learning
Language:Python 127
MaciejMazurowski / brain-segmentation
Deep learning based skull stripping and FLAIR abnormality segmentation in brain MRI using U-Net
deep-learning brain-segmentation unet python mri-images keras trained-weights matlab dsc brain-mri skull-stripping
Language:Python 123
NYUMedML / DARTS
Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation
brain-segmentation freesurfer deep-learning unet pytorch brain-mri medical-imaging artificial-intelligence
Language:Jupyter Notebook 67
vaibhavshukla182 / Brain-MRI-Segmentation
Smart India Hackathon 2019 project given by the Department of Atomic Energy
deep-learning image-segmentation medical-imaging mri-images machine-learning brain-mri mri brain-imaging brain-tumor-segmentation keras-tensorflow brain-tumor segmentation biomedical-image-processing unet tensorflow
Language:Python 38
nipype-preprocess-on-brain-MR
NatLee / nipype-preprocess-on-brain-MR
The project is used to do preprocessing on brain MR images by using Nipype.
brain mri mr medical-image-processing skull-stripping fsl ants registration enhancement segmentation bias-field-correction pipeline brain-mri brain-imaging brain-segmentation acpc dockerfile nipype python
Language:Python 32
iolag / UPD_study
This repository contains code from our comparative study on state of the art unsupervised pathology detection and segmentation methods.
anomaly-detection anomaly-detection-models anomaly-localization anomaly-segmentation brain-mri chest-xray-images retinal-fundus-images deep-learning
Language:Python 23
junyuchen245 / Preprocessed_IXI_Dataset
Preprocessed IXI brain MRI dataset with subcortical segmentation
public-dataset brain-mri image-registration datasets medical-imaging medical-image-registration medical
19
FeliMe / feature-autoencoder
Anomaly localization using autoencoder models in the feature space of a ResNet
anomaly-detection anomaly-localization brain-mri
Language:Python 17
weihaox / UMBRAE
UMBRAE: Unified Multimodal Decoding of Brain Signals | Unveiling the 'Dark Side' of Brain Modality
brain-mri neuroimaging multimodal-large-language-models
Language:Jupyter Notebook 17
Pramod04121999 / Pipelined-Tumor-Segmentation
A complete pipelined automatic process for skull stripping and tumor segmentation from Brain MRI using Thresholding.
thresholding-algorithm skull-stripping tumor-segmentation brain-mri image-analysis
Language:MATLAB 13
ZerojumpLine / DeepVolume
[TCybern2019] Brain MRI Super-Resolution based on Thick-Section MR Images from Two Planes.
brain-mri super-resolution
Language:Python 11
bryanlimy / clinical-super-mri
Code for "Deep Attention Super-Resolution of Brain Magnetic Resonance Images Acquired Under Clinical Protocols".
attention-models brain-mri deep-learning mri-super-resolution pytorch super-resolution
Language:Python 10
weihaox / BrainHub
BrainHub: Multimodal Brain Understanding Benchmark
brain-mri neuroimaging
Language:Python 9
EIDOSLAB / contrastive-brain-age-prediction
Code for the paper "Contrastive learning for regression in multi-site brain age prediction" | ISBI 2023 https://doi.org/10.1109/ISBI53787.2023.10230733
age-estimation age-regression brain-mri contrastive-learning neuroimaging regression
Language:Python 8
Rohit-Kundu / Segmentation-HHO_Altruism
Based on our paper on Multi-Objective Harris Hawk's Optimization with Altruism for Unsupervised Brain MRI Segmentation
brain-mri evolutionary-algorithms segmentation thresholding-algorithm
Language:MATLAB 8
zhiyunl / CAM-dMRI
Weakly Object Localization on brain dMRI using CAM
alexnet-pytorch brain-mri cam cnn connectome dti gap gmp googlenet hcp inception medical-image-processing vgg
Language:Jupyter Notebook 8
giocoal / ADNI-brain-MRI-alzheimer-WGAN-generation-and-classification
Brain T1-Weighted MRI Images Classification and WGAN Generation (Alzheimer's and Healthy patients) for the purpose of data augmentation. Implemented in TensorFlow, trained on ADNI dataset.
brain-mri generative-adversarial-network medical-imaging mri-generation mri-images wasserstein-gan wgan-gp
Language:Python 6
Moeinh77 / 3D-Convs-for-MRI-Classification
Gender classification on 3D IXI Brain MRI dataset with Keras and Tensorflow
keras mri mri-images brain-mri conv3d convolutional-neural-networks densenet3d
Language:Jupyter Notebook 5
pediatric-brain-age
AIM-KannLab / pediatric-brain-age
Code for paper "Diffusion Deep Learning for Brain Age Prediction and Longitudinal Tracking in Children through Adulthood
ai brain-mri diffusion-models diffusion-mri
Language:Python 4
febrianrachmadi / lots-iam-gpu
Automatic Irregular Texture Detection in Brain MRI without Human Supervision
medical-imaging computer-vision wmh-segmentation mri brain-mri unsupervised-detection unsupervised-learning
Language:Jupyter Notebook 4
arpitmaheshwari213 / Epitome-Extraction-and-Tumour-Classification-from-MRIs-of-Brain
A CNN based classification model for 3D NIfTI MRIs of the brain.
cnn cnn-keras cnn-classification cnn-model medical-image-processing brain brain-mri nifti python machine-learning deep-learning fsl keras
Language:Python 3
organize-ADNI
FahimFBA / organize-ADNI
Organize the entire ADNI dataset based on the group name (AD, MCI, CN) locally
ad adni adni-1 brain brain-mri cn mci script adni-script
Language:HTML 3
JohannesWiesner / pycat
A python package that imitates functions from the Computational Anatomy Toolbox - CAT12.
brain-imaging brain-mri cat12 neuroscience python reproducible-research structural-mri
Language:Python 3
aah8 / cnn-brain-mri
This repository contains Python code and resources for training a Convolutional Neural Network (CNN) to detect tumors in brain MRIs.
brain-mri brain-mri-classification convolutional-neural-network image-classification machine-learning neural-network artificial-intelligence python
Language:HTML 2
antonioscardace / Tina
Model for Identification of Alzheimer's Disease by Brain MRI.
adni alzheimers-disease binary-classification brain-mri densenet medical-imaging monai
Language:Jupyter Notebook 2
FinnBehrendt / Unsupervised-Anomaly-Detection-in-Brain-MRI
A Collection of Data sets and Approaches to UAD in Brain MRI.
anomaly-detection awesome-list brain-mri generative-model review self-supervision unsupervised-anomaly-detection
2
Jimut123 / bmsan
Machine Learning 2 Course Project at RKMVERI, 2021. Published at The Imaging Science Journal (2023), Paper: https://www.tandfonline.com/doi/full/10.1080/13682199.2023.2174657
attention-mechanism attention-r2-unet attention-unet brain-mri datasets deep-learning dice isic-2017 jaccard kvasir-seg lungs medical model multiresunet r2-unet segmentation skin-lesion unet
Language:Jupyter Notebook 2
SiyangJ / NeonateSeg
Neonate segmentation project at NIRAL, UNC, with Dr. Martin Styner.
brain-mri tensorflow niftynet deep-learning unet-image-segmentation unet fully-convolutional-network convolutional-neural-network
Language:Jupyter Notebook 2
xiaowuc2 / VAE-Alzheimer-Detection-Using-Imbalanced-MRI-Images
Variational Autoencoder based Imbalanced Alzheimer detection using Brain MRI Images
brain-mri alzheimers-disease class-imbalance variational-autoencoder
Language:Jupyter Notebook 2
febrianrachmadi / probunet-gan-vie
This is provisional codes for a conference paper titled "Probabilistic Deep Learning with Adversarial Training and Volume Interval Estimation - Better Ways to Perform and Evaluate Predictive Models for White Matter Hyperintensities Evolution".
deep-learning deep-neural-networks wmh-segmentation wmhs brain-mri
Language:Python 1
kenza-ily / brain_mri_schizophrenia
Predict schizophrenia from brain grey matter with Voxel-based morphometry
binary-classification brain-mri schizophrenia
Language:Jupyter Notebook 0
Pegah-Ardehkhani / Brain-MRI-Segmentation
U-Net from Scratch for Brain Tumor Segmentation
brain-mri brain-mri-images deep-learning mri mri-brain mri-brain-segmentation mri-images python segmentation tensorflow u-net u-net-keras dice-coefficient iou medical-imaging deep-neural-networks healthcare-imaging medical-image-processing ai-for-medical-diagnosis brain-imaging
Language:Jupyter Notebook 0
FahimFBA / organize-OASIS
Organize the entire OASIS1 dataset based on the group name (AD, MCI, CN) locally
ad brain brain-mri cn mci oasis script oasis-1 oasis-script
Language:HTML

brain-mri

nilearn / nilearn

arnab39 / FewShot_GAN-Unet3D

NYUMedML / CNN_design_for_AD

iitzco / deepbrain

MaciejMazurowski / brain-segmentation

NYUMedML / DARTS

vaibhavshukla182 / Brain-MRI-Segmentation

NatLee / nipype-preprocess-on-brain-MR

iolag / UPD_study

junyuchen245 / Preprocessed_IXI_Dataset

FeliMe / feature-autoencoder

weihaox / UMBRAE

Pramod04121999 / Pipelined-Tumor-Segmentation

ZerojumpLine / DeepVolume

bryanlimy / clinical-super-mri

weihaox / BrainHub

EIDOSLAB / contrastive-brain-age-prediction

Rohit-Kundu / Segmentation-HHO_Altruism

zhiyunl / CAM-dMRI

giocoal / ADNI-brain-MRI-alzheimer-WGAN-generation-and-classification

Moeinh77 / 3D-Convs-for-MRI-Classification

AIM-KannLab / pediatric-brain-age

febrianrachmadi / lots-iam-gpu

arpitmaheshwari213 / Epitome-Extraction-and-Tumour-Classification-from-MRIs-of-Brain

FahimFBA / organize-ADNI

JohannesWiesner / pycat

aah8 / cnn-brain-mri

antonioscardace / Tina

FinnBehrendt / Unsupervised-Anomaly-Detection-in-Brain-MRI

Jimut123 / bmsan

SiyangJ / NeonateSeg

xiaowuc2 / VAE-Alzheimer-Detection-Using-Imbalanced-MRI-Images

febrianrachmadi / probunet-gan-vie

kenza-ily / brain_mri_schizophrenia

Pegah-Ardehkhani / Brain-MRI-Segmentation

FahimFBA / organize-OASIS