brats

There are 4 repositories under brats topic.

jeya-maria-jose / KiU-Net-pytorch
Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI
brats deep-learning deep-neural-networks kiunet lits-challenge medical-image-segmentation medical-imaging pytorch segmentation semantic-segmentation
Language:Python 340
Mehrdad-Noori / Brain-Tumor-Segmentation
Attention-Guided Version of 2D UNet for Automatic Brain Tumor Segmentation
brain-tumor-segmentation keras tensorflow2 deep-learning mri brats u-net multi-view attention-mechanism
Language:Python 196
DeepBrainSeg
koriavinash1 / DeepBrainSeg
Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks
biomedical-image-analysis deep-learning brats ensemble-learning deep-convolutional-neural-networks brain-tumor-segmentation segmentation artificial-intelligence medical-image-analysis brain-segmentation brain-tumor
Language:Python 179
lescientifik / open_brats2020
Top 10 brats 2020 Solution
deep-learning semantic-segmentation medical-imaging medical-image-segmentation pytorch unet brats brats-challenge
Language:Python 157
athon2 / BraTS2018_NvNet
Implementation of NvNet
brats brats2018 segmentation vnet
Language:Python 130
pykao / BraTS2018-tumor-segmentation
We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.
deepmedic pytorch pytorch-deepmedic pytorch-3d-unet brain-tumor-segmentaiton brats medical-image-segmentation 3d-unet deep-learning deep-neural-networks
Language:Python 102
akhanss / BraTS-2020
A complete pipeline for BraTS 2020
brats brats2020 multimodal 3dunet brain-tumor-segmentation
Language:Python 57
SabareeshIyer / Brain-tumor-detection-in-3D-MRIs-using-DCGAN
Using DCGAN for segmenting brain tumors from brain image scans
brats dcgan dcgan-tensorflow gan generative-adversarial-network medical-image-processing medical-image-segmentation segmentation
Language:Python 56
polo8214 / Brain-tumor-segmentation-using-deep-learning
#BRATS2015 #BRATS2018 #deep learning #fully automatic brain tumor segmentation #U-net # tensorflow #Keras
brain-tumor mri u-net keras deep-learning tensorflow brats
Language:Jupyter Notebook 53
as791 / Multimodal-Brain-Tumor-Segmentation
Multimodal Brain Tumor Segmentation using BraTS 2018 Dataset.
semantic-segmentation brats-challenge unet-image-segmentation python3 jupyter-notebook colaboratory mri-segmentation nifti-gz nifti-format brats brain-tumor-segmentation
Language:Jupyter Notebook 45
lachinov / brats2019
segmentation brats brats2018 brats2019 unet unet-pytorch unet-3d brain-tumor-segmentation
Language:Jupyter Notebook 45
moucheng2017 / EMSSL
[MICCAI 2022 Best Paper Finalist] Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi Supervised Segmentation
miccai adversarial-attacks expectation-maximization out-of-distribution robustness segmentation semi-supervised-learning bayesian lung brats vessel-segmentation medical-image-computing computer-vision computervision em-algorithm miccai-2022 variational-inference miccai2022
Language:Python 31
charan223 / Brain-Tumor-Segmentation-using-Topological-Loss
A Tensorflow Implementation of Brain Tumor Segmentation using Topological Loss
brain-tumor-segmentation segmentation niftynet tensorflow losses brats-dataset brats image-segmentation deep-learning topology-validation topology fcn cnn 3d-segmentation
Language:Python 30
mandrakedrink / BraTS20_Unet3d_AutoEncoder
3d unet and 3d autoencoder for automatical segmentation and feature extraction.
brats2020 brats mri brain-tumor-segmentation
Language:Python 28
OSS-Net
ChristophReich1996 / OSS-Net
Official and maintained implementation of the paper "OSS-Net: Memory Efficient High Resolution Semantic Segmentation of 3D Medical Data" [BMVC 2021].
deep-learning segmentation semantic-segmentation computer-vision medical-imaging brats lits oss-net bmvc bmvc2021 3d-vision pytorch
Language:Python 24
woodywff / nas_3d_unet
Neural Architecture Search for Gliomas Segmentation on Multimodal Magnetic Resonance Imaging
brain-tumor-segmentation brats neural-architecture-search pytorch segmentation
Language:Python 20
gaurav104 / WSS-CMER
Code for the paper : "Weakly supervised segmentation with cross-modality equivariant constraints", available at https://arxiv.org/pdf/2104.02488.pdf
weakly-supervised-learning weakly-supervised-segmentation class-activation-map class-activation-maps grad-cam grad-cam-visualization self-learning multi-modal-learning multi-modal-imaging transformation-equivariance deep-learning medical-imaging brats brats2019
Language:Python 19
Alxaline / BraTS21
Solution of the RSNA/ASNR/MICCAI Brain Tumor Segmentation (BraTS) Challenge 2021
brain-tumor-segmentation brats-challenge brats2021 deep-learning medical-imaging pytorch tumor-segmentation unet brats
Language:Python 14
lachinov / brats2018-graphlabunn
brats brats2018 segmentation
Language:Python 12
mtancak / PyTorch-UNet-Brain-Cancer-Segmentation
Creating a U-Net In PyTorch to segment the BraTS 2020 dataset
ai unet brats pytorch cnn medical-imaging image-segmentation computer-vision deep-learning
Language:Python 12
xmindflow / MMCFormer
[MIDL 2023] MMCFormer: Missing Modality Compensation Transformer for Brain Tumor Segmentation
segmentation brain brain-tumor-segmentation brats missing-modality transformers
Language:Python 10
rachitsaluja / BraTS-2023-Metrics
Official BraTS 2023 Segmentation Performance Metrics
brats brats-challenge deep-learning performance-metrics segmentation segmentation-models
Language:Python 8
yunyuntsai / BraTS-brain-tumer-segmentation
Code for brain tumor segmentaion
biomedical-image-analysis brain-tumor-segmentation brats computer-vision pytorch
Language:Jupyter Notebook 8
marianocabezas / challenges2017
Repository with models, experiments and approaches for the BraTS 2017 and iSeg segmentation challenges.
cnn-model brats challenge tumor segmentation
Language:Python 6
ali-sedaghi / Interactive-BraTS
Interactive Brain Tumor Segmentation with FocalClick and CDNet
brain-tumor-segmentation brats interactive-image-segmentation
Language:Python 5
insomnia33 / TCC-EngBio2020
TCC de Engenharia Biomédica PUCSP de 2020
ia django models brats cnn unet lndb covid
Language:JavaScript 5
MohamadZeina / 3D-Patch-Based-Keras-Unet
A modular, 3D unet built in keras for 3D medical image segmentation. Also includes useful classes for extracting and training on 3D patches for data augmentation or memory efficiency.
segmentation keras keras-unet unet unet-image-segmentation unet-keras unet-segmentation deep-learning 3d-unet patch patch-based patch-wise 3d-patch patch-extraction 3d-patch-extraction patch-based-unet keras-tensorflow medical-imaging brats oasis
Language:Python 5
nauyan / TumorClassification
deep-learning classification brats brain-tumor-classification keras-tensorflow convolutional-neural-networks
Language:Python 5
Optimized-U-Net
miladsade96 / Optimized-U-Net
Optimized U-Net for Brain Tumor Segmentation
python python3 cv computer-vision deep-learning deep-neural-networks unet tumor-segmentation brats brain-tumor-segmentation
Language:Python 4
han-liu / awesome-missing-modality-for-medical-images
A comprehensive review of techniques to address the missing-modality problem for medical images
brain-tumor-segmentation brats brats-challenge medical-image-segmentation missing-modality multi-modality
3
nmn-pandey / brain-tumour-segmentation
Code for automated brain tumor segmentation from MRI scans using CNNs with attention mechanisms, deep supervision, and Swin-Transformers. Based on my Master's dissertation project at Brunel University, it features 3 deep learning models, showcasing integration of advanced techniques in medical image analysis.
attention-mechanism brats brats-challenge cnn deep-learning deep-neural-networks medical-image-segmentation medical-imaging pytorch swin-transformer transformers brats2023
Language:Python 3
vilibili / Brain-tumor-segmentation-pytorch
brats brats2021 segmentation image-segmentation brain-tumor-segmentation deep-learning deep-neural-networks computer-vision convolutional-neural-networks
Language:Python 3
AGnias47 / brats-challenge-cis-5528
Brain Tumor Segmentation Pipeline for BraTS Challenge
brats monai optuna segmentation unet-image-segmentation
Language:Python 2
AlisherMyrgyyassov / BRATS-DeepLearning-Utility-Toolkit
The BRATS Toolkit is a suite of tools designed to facilitate the processing and analysis of the Brain Tumor Segmentation (BRATS) dataset.
brats deep-learning deep-learning-toolkit
Language:Jupyter Notebook 2
gama-ufsc / brain-extraction-for-tumor-segmentation
brain-extraction brats deep-learning medical-imaging
Language:Python 2
hb-liu / Normal-Brain-Boost-Tumor-Segmentation
Multimodal Brain Tumor Segmentation Boosted by Monomodal Normal Brain Images
brats normal-images segmentation vae
Language:Python 2

brats

jeya-maria-jose / KiU-Net-pytorch

Mehrdad-Noori / Brain-Tumor-Segmentation

koriavinash1 / DeepBrainSeg

lescientifik / open_brats2020

athon2 / BraTS2018_NvNet

pykao / BraTS2018-tumor-segmentation

akhanss / BraTS-2020

SabareeshIyer / Brain-tumor-detection-in-3D-MRIs-using-DCGAN

polo8214 / Brain-tumor-segmentation-using-deep-learning

as791 / Multimodal-Brain-Tumor-Segmentation

lachinov / brats2019

moucheng2017 / EMSSL

charan223 / Brain-Tumor-Segmentation-using-Topological-Loss

mandrakedrink / BraTS20_Unet3d_AutoEncoder

ChristophReich1996 / OSS-Net

woodywff / nas_3d_unet

gaurav104 / WSS-CMER

Alxaline / BraTS21

lachinov / brats2018-graphlabunn

mtancak / PyTorch-UNet-Brain-Cancer-Segmentation

xmindflow / MMCFormer

rachitsaluja / BraTS-2023-Metrics

yunyuntsai / BraTS-brain-tumer-segmentation

marianocabezas / challenges2017

ali-sedaghi / Interactive-BraTS

insomnia33 / TCC-EngBio2020

MohamadZeina / 3D-Patch-Based-Keras-Unet

nauyan / TumorClassification

miladsade96 / Optimized-U-Net

han-liu / awesome-missing-modality-for-medical-images

nmn-pandey / brain-tumour-segmentation

vilibili / Brain-tumor-segmentation-pytorch

AGnias47 / brats-challenge-cis-5528

AlisherMyrgyyassov / BRATS-DeepLearning-Utility-Toolkit

gama-ufsc / brain-extraction-for-tumor-segmentation

hb-liu / Normal-Brain-Boost-Tumor-Segmentation