tissue

There are 0 repository under tissue topic.

• slowkow / snpsea

  :bar_chart: Identify cell types and pathways affected by genetic risk loci.

  algorithmbioinformaticsenrichmentgenegene-setsgwasrisk-locitissue
  Language:C++ 35

• Mr-Milk / SpatialTis

  Spatial analysis toolkit for single cell multiplexed tissue data

  single-cellspaital-analysistissuespatial-distributionheterogeneitynetworkhotspotimaging-mass-cytometrymultiplexed-ion-beam-imagingcell-cell-interactionspatial-analysisspatial-omics
  Language:Python 29

• DSLituiev / slideslicer

  a toolbox for manipulation of digital pathology slides and annotations

  annotationshistologymaskopenslidepathologyread-slidesslideslicertissuewsi
  Language:Jupyter Notebook 19

• titonmoy / Monte-Carlo

  Monte Carlo Simulation of Light-Tissue Interaction

  monte-carlorandom-walkepidermismelaninpythonlighttissueinteraction
  Language:Jupyter Notebook 14

• smohammadi96 / brainweb_tissue_segmentation_unet

  Brain tissue segmentation using Unet

  braindeep-learningmrisegmentationtissueunet
  Language:Python 12

• XiaLabBioinformatics / m6AMethylation

  m(6)A methylation analysis

  humantissuem6abioinformatics
  Language:Python 10

• VirtualEmbryo / foambryo

  Python package to infer tensions and pressures from 3D microscopy images of embryos and tissues

  embryogenesisfoaminferencepressuretissueimage-analysissurface-tension
  Language:Python 9

• daltare / cedenTools

  R package for retrieving data from the California Environmental Data Exchange Network (CEDEN) via CEDEN's web services.

  api-clientopen-datawaterwater-qualitytoxicitybenthichabitattissuedata-retrieval
  Language:R 6

• aquimb / Autofocus-URJC

  This is an open source project to develop an automated embedded focusing system

  microscopyautofocusalgorithmsanalysistissue
  Language:Python 5

• bhklab / PharmacoDB-JS

  Search across publicly available datasets to find instances where a drug or cell line of interest has been profiled.

  experimentscompoundsdatasetstissuecell-linesdrug-targetsdrug-dose-response-curves
  Language:JavaScript 5

• Serian1992 / ImgBio

  Tissue segmentation and quantification on histopathological images

  tissuesegmentationandquantification
  Language:Python 4

• merlijnvb / 8QA05

  OGO gene-expression

  genes-expresseddiseasesclustersanalysistissue
  Language:Jupyter Notebook 3

• BabakNSafa / ReactiveBond

  An implementation of Reactive Inelasticity framework for uniaxial deformations

  biomechanicsinelasticitymechanicstissue
  Language:MATLAB 2

• GuoBioinfoLab / SEGtool

  SEGtool is an R package with self-adaptive function and high accuracy for specifically expressed gene detection

  gene-expressiontissuedetect-segs
  Language:R 2

• HyA-FIUNER / HyA-FIUNER.github.io

  Sitio web de la Cátedra de Histología y Anatomía de la FIUNER

  docusaurusimagenesmarkdownanatomyhistologytissuemicroscopy-images
  Language:JavaScript 2

• kernelshreyak / livmach

  An organism simulation framework based on cell growth and resultant emergent phenomena.

  simulationbiological-simulationsbiologyartificial-intelligencedigital-dnaorganism-simulationdna-transcriptiontissuesystems-biology
  Language:C++ 2

• sbesson / plant-tissue

  A collection of MATLAB tools to analyse the division planes of plant cells and plant tissues

  matlabtissuedivision
  Language:MATLAB 2

• eai04191 / tissue-checkin-extension

  ボタンを押すとTissueのチェックインリンクを開くシンプルな拡張機能

  browser-extensiontissue
  Language:TypeScript 1

• NamChain-Open-Initiative-Research-Lab / DaaNamchain-PoC

  Blockchain Proof of Concept for DaaNamChain. Organ, Tissue and Blood Donation.

  organblockchain-proofethereumbloodtissue
  Language:HTML 1

• ComplexOrganizationOfLivingMatter / LimeSeg_Pipeline

  "A quantitative principle to understand 3D cellular connectivity in epithelial tubes" Gomez-Galvez et al

  computational-biologycomputational-geometrytissuedevelopmental-biology
  Language:MATLAB 0

• ethanlarochelle / gamos5_2_docker

  Gamos 5.2 with Dartmouth tissue optics Docker scripts

  gamoshigh-energy-physicsmonte-carloopticstissue
  Language:Shell 0

• gmoeu / transcriptional-biomarkers-metaanalysis

  Data and R code to reproduce the results from 'Transcriptional responses as biomarkers of general toxicity' (Ekelund Ugge et al. 2022).

  aquatic-toxicologybiomarkersbivalvecatalaseecotoxicologyexposure-timeglutathione-s-transferaseheat-shock-proteinmeta-analysismeta-regressionmetallothioneinmetalspublication-biasrt-qpcrsuperoxide-dismutasesystematic-reviewtissuetoxic-unittoxicitytranscriptional-biomarkers
  0

• jhrcook / tidy_GTEx

  The GTEx data in a tidy format for use in R

  gtexrtidytidyversegene-expressiontissue
  Language:R