heterogeneity

There are 1 repository under heterogeneity topic.

TsingZ0 / PFLlib
We expose this user-friendly algorithm library (with an integrated evaluation platform) for beginners who intend to start federated learning (FL) study
non-iid federated-learning personalization pytorch python distributed-computing heterogeneity differential-privacy privacy imagenet domainnet iot attack dlg privacy-protection
Language:Python 1181
comunica / comunica
📬 A knowledge graph querying framework for JavaScript
query-engine sparql rdf triple-pattern-fragments graphql javascript hacktoberfest federation heterogeneity decentralization
Language:TypeScript 410
CharafeddineMechalikh / PureEdgeSim
PureEdgeSim: A simulation framework for performance evaluation of cloud, fog, and pure edge computing environments.
fog simulation-toolkit edge edge-computing fog-computing cloud-computing cloudsim cloudsimplus simulation simulation-framework modeling performance-evaluation heterogeneity tasks scheduling orchestration algorithm mobility mist-computing
Language:Java 168
JEFworks-Lab / HoneyBADGER
HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data
single-cell-analysis single-cell-rna-seq cnv-detection transcriptomics subpopulation hmm bayesian heterogeneity bioinformatics
Language:R 95
c-gabri / Federated-Learning-PyTorch
PyTorch implementation of Federated Learning algorithms FedSGD, FedAvg, FedAvgM, FedIR, FedVC, FedProx and standard SGD, applied to visual classification. Client distributions are synthesized with arbitrary non-identicalness and imbalance (Dirichlet priors). Client systems can be arbitrarily heterogeneous. Several mobile-friendly models are provided
federated-learning fedsgd fedavg fedavgm fedir fedvc fedprox non-iid imbalance heterogeneity classification pytorch sgd
Language:Python 62
TsingZ0 / FL-IoT
This is a platform containing the datasets and federated learning algorithms in IoT environments.
communication differential-privacy distributed-systems federated-learning heterogeneity human-activity-recognition iot machine-learning personalization platform privacy python pytorch
Language:Python 43
utcs-scea / altis
A benchmarking suite for heterogeneous systems. The primary goal of this project is to improve and update aspects of existing benchmarking suites which are either insufficient or outdated.
altis benchmarking-suite gpu cuda heterogeneity rodinia-benchmark-suite accelerator nvidia
Language:C 34
Mr-Milk / SpatialTis
Spatial analysis toolkit for single cell multiplexed tissue data
single-cell spaital-analysis tissue spatial-distribution heterogeneity network hotspot imaging-mass-cytometry multiplexed-ion-beam-imaging cell-cell-interaction spatial-analysis spatial-omics
Language:Python 29
proroklab / HetGPPO
Heterogeneous Multi-Robot Reinforcement Learning
heterogeneity multi-agent-reinforcement-learning multi-agent-systems robotics
Language:Python 29
gsnrguo / QGIS-Geographical-detector
QGIS plugin of geographical detector
geodetector heterogeneity spatial-analysis geographical-detector
Language:Python 27
shinaji / texture_analysis
Texture Analysis test tool for PET images
texture-analysis ct-images glcm pet-images heterogeneity texture-values
Language:Python 26
andreaskapou / scMET
Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
bayesian-inference generalised-linear-models methylation-analysis single-cell heterogeneity hierarchical-models
Language:R 19
RasLillebo / HighFrequencyEconometrics-HAR-vs.-Neural-Networks
Inspired by Hillebrand & Medeiros (2009) and Corsi (2009), I put neural networks in a High frequency environment, and tested the performance of the two models (HAR & Neural Networks). - The data used in this project is 2 years worth of intraday 5-minute realized volatility (See: Sheppard, Patton, Liu, 2012) from 20 Dow Jones stocks, that has been scrutinized using bivariate analysis and manipulation into a single dimension.
heterogeneity heterogeneous-network high-frequency-trading neural-network
Language:R 19
Mr-Milk / SpatialEntropy
A python implementation of spatial entropy
spatial entropy heterogeneity
Language:Python 18
ryantd / veloce
WIP. Veloce is a low-code Ray-based parallelization library that makes machine learning computation novel, efficient, and heterogeneous.
ray distributed pytorch distributed-computing data-parallelism parameter-server deep-learning model-parallelism sparsity heterogeneity
Language:Python 18
yukai-yang / PSTR
an R package for testing, estimating and evaluating the Panel Smooth Transition Regression (PSTR) model.
panel-data nonlinearity smooth-transition regression modelling bootstrap wild-bootstrap wild-cluster-bootstrap linearity model-specifition parallel-computing heterogeneity pstr-model transition-variables evaluation cran bootstrap-test
Language:R 16
lunan0320 / FedPHE
Efficient and Straggler-Resistant Homomorphic Encryption for Heterogeneous Federated Learning
bfv ckks federated-learning heterogeneity homomorphic-encryption paillier
Language:Python 9
meyer-lab / tHMM
A general Python framework for using hidden Markov models on binary trees or cell lineage trees.
inference bioengineering cell-biology heterogeneity drug-response
Language:Python 9
csbg / neuroblastoma
Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis
bone-marrow heterogeneity metastasis microenvironment monocytes neuroblastoma scatac-seq scrna-seq single-cell
Language:Jupyter Notebook 8
UcarLab / iasva
Iteratively Adjusted Surrogate Variable Analysis
transcriptomics single-cell-rna-seq heuristic-algorithm heterogeneity r single-cell
Language:R 8
nrohani / MolecularSubtypes
Classifying Breast Cancer Molecular Subtypes
breast-cancer tumors heterogeneity subtype cancer-research unsupervised-machine-learning machine-learning neural-network breast-cancer-tumor breastcancer breastcancer-classification molecular-subtype subtypes pam50 clustering bioinformatics cancer
Language:Python 7
covid19sdtool
carsaesi / covid19sdtool
R code for the discovery of COVID-19 subgroups by symptoms and comorbidities.
covid-19 covid19 subgroup-discovery subgroup-analysis data-quality heterogeneity variability frailty biomedical-informatics biomedical-data-science
Language:HTML 5
jaredhuling / vennLasso
Variable selection for heterogeneous populations using the vennLasso penalty
heterogeneity machine-learning penalized-regression r-stats risk-modelling variable-selection
Language:C++ 5
EHRsourceVariability
carsaesi / EHRsourceVariability
Measuring and visualizing biomedical data variability/heterogeneity across data sources
variability heterogeneity frailty biomedical-data-science biomedical-informatics data-quality biomedical-data electronic-health-records dataset-shifts
Language:R 4
cit-bioinfo / WISP
Weighted In Silico Pathology: a novel approach to assess intra-tumoral heterogeneity
deconvolution genomics tumor heterogeneity transcriptomics methylation cancer
Language:R 4
CMET-UGent / MicroRaman
MicroRaman is an R package to process microbial Raman Spectroscopy data
raman microbiology diversity-measurement heterogeneity
Language:R 4
fjcamlab / deco
DECO :: Decomposing heterogeneous population cohorts for patient stratification and discovery of biomarkers using omic data profiling. R package
differential-expression heterogeneity omics r sampling-methods deco stratification omic-data-profiling patients-stratification heterogeneous-populations bioinformatics
Language:R 4
arunabh98 / Tomography-Heterogeneity
Authors' implementation for "Ab initio tomography with object heterogeneity and unknown viewing parameters", IEEE ICIP 2019
cryo-em heterogeneity tomography
Language:MATLAB 3
An_emergent_soil_enzyme_decomposition_model
bioatmosphere / An_emergent_soil_enzyme_decomposition_model
Source data and code supporting model-based analysis of emergent properties (ECA) of soil enzyme-driven organic matter decomposition
jupyter jupyter-notebook soil enzyme michaelis-menten ecosystem-model ecological-scaling heterogeneity emergent eca equilibrium-chemistry-approximation
Language:Jupyter Notebook 3
magosil86 / getmstatistic
Quantifying Systematic Heterogeneity in Meta-Analysis
heterogeneity meta-analysis gwas systematic-heterogeneity stata outlier-studies heartgenes214 mstatistic getmstatistic
Language:R 3
tbalan / frailtyEM
The development version of the frailtyEM R package, that fits several types of shared frailty models
frailty survival heterogeneity r
Language:R 3
viktormiok / AstrocytesHeterogenityARC
Analysis of proteomics, bulk and single cell RNA-seq data to investigate reorganisation of astrocytic molecular identity
brain heterogeneity proteomics rna-seq single-cell
Language:Jupyter Notebook 3
cancersysbio / BreastCancerITH
breast-cancer heterogeneity treatment-effects cancer-evolution
Language:Python 2
archettialberto / federated_survival_datasets
Build realistic heterogeneous datasets for federated survival analysis in a reproducible way.
data-preparation dataset datasets federated-learning heterogeneity survival-analysis time-to-event
Language:Jupyter Notebook 1
Mutahar789 / FLTestbed
Federated learning testbed for real-world mobile devices
cpu-profiling federated-learning heterogeneity memory-profiling mobile-devices pygrid pysyft
Language:Jupyter Notebook 1
PaoyangLab / MeH
The tools for estimating methylation heterogeneity
heterogeneity methylation ngs
Language:Python 1

heterogeneity

TsingZ0 / PFLlib

comunica / comunica

CharafeddineMechalikh / PureEdgeSim

JEFworks-Lab / HoneyBADGER

c-gabri / Federated-Learning-PyTorch

TsingZ0 / FL-IoT

utcs-scea / altis

Mr-Milk / SpatialTis

proroklab / HetGPPO

gsnrguo / QGIS-Geographical-detector

shinaji / texture_analysis

andreaskapou / scMET

RasLillebo / HighFrequencyEconometrics-HAR-vs.-Neural-Networks

Mr-Milk / SpatialEntropy

ryantd / veloce

yukai-yang / PSTR

lunan0320 / FedPHE

meyer-lab / tHMM

csbg / neuroblastoma

UcarLab / iasva

nrohani / MolecularSubtypes

carsaesi / covid19sdtool

jaredhuling / vennLasso

carsaesi / EHRsourceVariability

cit-bioinfo / WISP

CMET-UGent / MicroRaman

fjcamlab / deco

arunabh98 / Tomography-Heterogeneity

bioatmosphere / An_emergent_soil_enzyme_decomposition_model

magosil86 / getmstatistic

tbalan / frailtyEM

viktormiok / AstrocytesHeterogenityARC

cancersysbio / BreastCancerITH

archettialberto / federated_survival_datasets

Mutahar789 / FLTestbed

PaoyangLab / MeH