There are 2 repositories under openslide topic.
Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch sampling and storing using OpenSlide. Patches may be stored in LMDB, HDF5 files, or to disk. It is highly recommended to fork and download this repository so that personal customisations can be made for your work.
Conversion tool/library for converting whole slide images to DICOM
Full package for applying deep learning to virtual slides.
Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
:microscope: Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.
Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
A pyqt5 widget for viewing whole-slide images with Openslide
a toolbox for manipulation of digital pathology slides and annotations
European Computer Vision Library (ECVL). A general-purpose computer vision library developed to support healthcare use cases within the DeepHealth project, with the aim of facilitating the integration of existing state-of-the-art libraries.
LabelSlide is a slide annotation tool and label object bounding boxes in virtual slides (generally used in pathology)
An application that can quickly view large images like .tif, .svs, .bif, .hdpi, .vms and .mrxs file(s).
An ITK ImageIO module for the OpenSlide library.
manylinux wheel files for girder/large_image dependencies
A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.
A library for training deep neural networks using pathology data by accessing patches on-the-fly
slideToolkit: a free toolset for analyzing wholeslide high-resolution digital histological images.
Unofficial Go bindings for OpenSlide - I don't like Go, by the way.
TensorFlow cunstom runner to read micro images from whole slide images.
3D visualisation using Inviwo and OpenSlide
A pyqt5 widget for viewing collection of whole-slide images with Openslide
A plugin for TensorBoard to show WSI images. The plugin is based on Deep Zoom Image (DZI).
Convenient interface for generating tiles from Aperio SVS format images
A pyqt5 GUI for CBIR in whole-slide images with Openslide
Parse OpenSlide properties (generated by `openslide-show-properties`) to JSON
PyQt WSI(Whole Slide Images) viewer
Project title: Using Deep Learning to predict overall survival times for breast cancer from H&E whole slide biopsy
Process Aperio SVS images in S3 with vips/openslide.