ComplexOrganizationOfLivingMatter / LimeSeg_Pipeline

"A quantitative principle to understand 3D cellular connectivity in epithelial tubes" Gomez-Galvez et al

Home Page:https://www.biorxiv.org/content/10.1101/2020.02.19.955567v1

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LimeSeg_Pipeline

It is the main repository for the project "Epithelial laws" by Gomez-Galvez et al. The input of this project is the output of the LimeSeg plugin of FIJI (http://imagej.net/LimeSeg/).

The steps of this project are explained on: https://github.com/ComplexOrganizationOfLivingMatter/LimeSeg_Pipeline/blob/master/LimeSegTutorial.md#step-3-matlabs-refining-process.

Here, we explained how to run this repository and all the data necessary to do so.

IMPORTANT This project depends on code from https://github.com/ComplexOrganizationOfLivingMatter/Epithelia3D

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"A quantitative principle to understand 3D cellular connectivity in epithelial tubes" Gomez-Galvez et al

https://www.biorxiv.org/content/10.1101/2020.02.19.955567v1

License:GNU General Public License v3.0


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