mansikath's repositories
whole-genome-sequencing-pipeline
A comprehensive workflow for de novo assembly of whole-genome shotgun sequencing data using Velvet, followed by BLAST searches to analyze assembled contigs.
BioSequence-Processor
This repository empowers you to perform operations such as generating complementary sequences, translating DNA to RNA, and identifying open reading frames (ORFs) with ease. Also DNA-to Protein and Protein-to DNA
Fasta-to-Genbank-Converter
A simple Python script using Biopython to convert FASTA files to GenBank format. The script prompts the user for input and output filenames, along with the molecule type (default is DNA). Ensure accurate and annotated GenBank files for your biological sequence data.
FASTQ-to-BAM
This repository streamlines the conversion of raw DNA sequencing data from FASTQ to BAM format, incorporating scripts that not only facilitate BAM conversion but also generate Sequence Alignment Map (SAM) files.
MyAlignmentIssue
gnuplot my_plot.gp gnuplot 5.4 patchlevel 8 Reading delta file filtered.delta Writing plot files my_plot.fplot, my_plot.rplot ERROR: No alignment data to plot line 0: Cannot load input from 'my_plot.gp'
Python-Hello-World
A simple Python 'Hello World' program to introduce beginners to the language and showcase the basic syntax and structure.
random-module
Today, I learned about the "random" module in Python.
Variant-calling
Repository for variant calling utilizing bioinformatics tools and databases