kidney

There are 0 repository under kidney topic.

muellerdo / kits19.MIScnn
Kidney Tumor Segmentation Challenge 2019: MIScnn - 3D Residual U-Net
deep-learning kidney kits19 segmentation u-net medical-image-processing convolutional-neural-networks medical-image-segmentation
Language:Python 37
p4rkerw / Muto_Wilson_NComm_2020
Workflow for analysis of healthy human kidney by snRNAseq and snATACseq
allele-specific-expression bioinformatics genomics kidney single-cell single-cell-atac-seq single-cell-rna-seq
Language:R 24
tarolangner / ukb_segmentation
PyTorch implementation for 2.5D U-Net segmentation of UK Biobank neck-to-knee body MRI
segmentation mri u-net kidney parenchyma pytorch deep-learning uk-biobank neural-networks semantic-segmentation
Language:Python 17
p4rkerw / Wilson_Muto_NComm_2022
Containerized workflow for analysis of human diabetic kidney disease by snRNA-seq and snATAC-seq
allele-specific ckd diabetes heritability kidney single-cell-atac-seq single-cell-rna-seq single-cell-sequencing
Language:R 15
ShishuaiHu / BA-Net
Code for [MLMI 2019] [KiPA22 Challenge] [AMOS 2022 Challenge] [MICCAI 2022 Workshop] Boundary-Aware Network for Medical Image Segmentation.
kidney medical-image-segmentation abdominal-organ
Language:Python 11
epoc-aki
alwinw / epoc-aki
📈 Evaluation of the Predictive value of short-term Oliguria and minor Creatinine increases for Acute Kidney Injury in ICU
r time-series creatinine oliguria statistical-analysis logistic-regression aki acute-kidney-failure kidney classification rmd bookdown
Language:R 8
fitushar / multi-label-weakly-supervised-classification-of-body-ct
A rule-based algorithm enabled the automatic extraction of disease labels from tens of thousands of radiology reports. These weak labels were used to create deep learning models to classify multiple diseases for three different organ systems in body CT.
weakly-supervised-learning ct-scan-images rule-based-modeling 3d-segmentation 3d 3d-classification tensorflow2 3d-resnet ct liver-disease kidney kidney-disease-prediction kidney-disease liver-disease-prediction multi-label-image-classification multi-label-disease machine-learning multi-label-disease-classification
Language:Python 7
Oshlack / combes-organoid-paper
Analysis code and output for the Combes kidney organoid scRNA-seq paper https://doi.org/10.1186/s13073-019-0615-0
analysis single-cell rna-seq kidney kidney-organoids
Language:R 7
junqiangchen / KiPA2022-Challenge
KiPA2022——Multi-Structure Segment for Renal Cancer Treatment.
ct dice focal-loss kidney pytorch unet3d kidneytumor
Language:Python 6
lazappi / phd-thesis-analysis
Code for the analysis chapter of my PhD thesis looking at kidney organoid scRNA-seq data
phd-thesis analysis analysis-website kidney organoids single-cell rna-seq single-cell-rna-seq scrna-seq
Language:R 6
lshpaner / kfre
A Python library for kidney failure risk estimation using Tangri's KFRE model
ckd kfre kidney kidney-disease-prediction python python-library
Language:Python 4
samisaf / Identifying-AKI-during-hospitalization-based-on-serum-creatinine-trends
Implements an algorithm that helps identify episodes of acute kidney injury that develop during hospitalization
acute kidney injury renal aki
Language:Python 4
ArianAzg / User-friendly-Graphical-User-Interface-for-Ultrasound-Scan-Processing
User-friendly software for organizing/processing/annotating ultrasound scans of sea turtles
heart kidney liver sea-turtles ultrasound ultrasound-scans
Language:Python 3
Layton-Lab / nephron
Computational models for epithelial transport along the nephron.
kidney computational-biology nephron physiology mathematical-biology
Language:Python 3
taneishi / UNet_Glomerulus
Glomerular Segmentation of Kidney Images with U-Net
glomerulus medical-imaging pytorch segmentation u-net hubmap kidney
Language:Python 3
AlmudenaBravoC / CAD-ultrasound-renal-diagnosis
Development of a renal ultrasound computer aided tool using deep learning techniques.
convolutional-neural-networks deep-learning kidney parenchyma segmentation-models
Language:Jupyter Notebook 2
covidclinical / Phase2.1AKIRPackage
R Package to run statistical analyses for COVID-19 patients with acute kidney injury.
aki covid-19 kidney
Language:R 2
halbritter-lab / kidney-genetics
Kidney-Genetics - database of kidney-related genes
database genes kidney kidney-disease nephrology raredisease
Language:HTML 2
mstadt / nephron
This is latest version of sex-specific mathematical models for epithelial transport along the nephron. Models are implemented in Python 3.
computational-biology kidney diabetes computational-physiology sex-specific-model nephron rat human pregnancy
Language:Python 2
myrical-app / myrical-v2
🔬A revolutionary open-source tool for automated multi-central, domino-based kidney transplant matching.
kidney-transplantation kidney kidney-allocation transplant medical medical-application
Language:TypeScript 2
wahidpanda / Kideny-Stone-Detection-ML
deep-neural-networks kidney kidney-disease kidney-disease-prediction machine-learning
Language:Jupyter Notebook 2
AdrienJaugey / Mask-R-CNN-Inference-Tool
Mask R-CNN Inference Tool used for Nephrology analysis
mask-rcnn matterport-mask-rcnn kidney cell-recognition
Language:Python 1
darsydarssan / PestKidneyGrace
To reproduce the work of Grace et al.
pesticides kidney nhanes
Language:Stata 1
Epithelial-Systems-Biology-Laboratory / KTEA
Repository for Kidney Tubule Expression Atlas project
proteomics kidney
Language:R 1
fraca98 / pkdCystSelection
Extension 3DSlicer for Manually Kidney Cysts Selection
3dslicer adpkd kidney
Language:Python 1
junlinguo / CellViT-Kidney
First Large-scale universal nuclei instance segmentation model that finetunes CellViT (dino) on diverse kidney nuclei data from diverse institutions
computer-vision deep-learning instance-segmentation kidney nuclei
Language:Python 1
KohSoonho / Kidney.app
The formula of eGFR
egfr bsa formula kidney r shiny-apps
Language:R 1
PERMIT-project / Introduction
Introduction to PERMIT project resources
heart-failure patients patient-data renal kidney ehr-phenotyping
1
ytakemon / TheAgingKidney
qtl kidney aging bioinformatics-analysis genomics
Language:R 1
fraca98 / C-pkdCystSelection
CystSegmentation - Kidney Cysts Segmentaion
kidney adpkd
Language:C++ 0
halbritter-lab / pld-progression-grouper
PLD-Progression Grouper - visualize and analyze the progression of Polycystic Liver Disease (PLD) through user-inputted clinical data
kidney kidney-disease liver-disease rare-disease pld polycystic-liver-disease adpkd adpld prkcsh sec63 tlv ntlv
Language:Vue 0
p4rkerw / Wilson_GBio_2024
Containerized workflow for single cell detection of loss of Y chromosome and other mosaic chromosomal alterations in chronic kidney disease
aneuploidy ckd copy-number-variation kidney single-cell single-cell-atac-seq single-cell-genomics single-cell-multiomics single-cell-rna-seq spatial-transcriptomics loss-of-y-chromosome mosaic-chromosomal-alterations somatic-mosaicism
Language:R 0
temmyfioye / predictingchronickidneydisease
Predicted chronic kidney disease using biomarkers with Random Forest
kidney kidney-disease kidney-disease-prediction random-forest random-forest-classifier
Language:Jupyter Notebook 0
Chronic-Kidney-Disease-Prediction-Using-ML
Abdulmuqe / Chronic-Kidney-Disease-Prediction-Using-ML
Chronic Kidney Disease Prediction Using ML | Website |
chronic-kidney-disease data-preprocessing data-science decision-trees feature-extraction healthcare-analysis jupyter-notebook kidney logestic-regression machine-learning medical-data-analysis medical-diagnosis prediction predictive-modeling python random-forest svm healthcare-al
Language:Jupyter Notebook
fraca98 / Python-pkdCystsSelection
CystSegmentation - Kidney Cysts Segmentaion
adpkd kidney
Language:Python
mwiens91 / kidney-arterial-tree
Draws accurate kidney-specific arterial networks
kidney nephron bifurcating-tree
Language:JavaScript

kidney

muellerdo / kits19.MIScnn

p4rkerw / Muto_Wilson_NComm_2020

tarolangner / ukb_segmentation

p4rkerw / Wilson_Muto_NComm_2022

ShishuaiHu / BA-Net

alwinw / epoc-aki

fitushar / multi-label-weakly-supervised-classification-of-body-ct

Oshlack / combes-organoid-paper

junqiangchen / KiPA2022-Challenge

lazappi / phd-thesis-analysis

lshpaner / kfre

samisaf / Identifying-AKI-during-hospitalization-based-on-serum-creatinine-trends

ArianAzg / User-friendly-Graphical-User-Interface-for-Ultrasound-Scan-Processing

Layton-Lab / nephron

taneishi / UNet_Glomerulus

AlmudenaBravoC / CAD-ultrasound-renal-diagnosis

covidclinical / Phase2.1AKIRPackage

halbritter-lab / kidney-genetics

mstadt / nephron

myrical-app / myrical-v2

wahidpanda / Kideny-Stone-Detection-ML

AdrienJaugey / Mask-R-CNN-Inference-Tool

darsydarssan / PestKidneyGrace

Epithelial-Systems-Biology-Laboratory / KTEA

fraca98 / pkdCystSelection

junlinguo / CellViT-Kidney

KohSoonho / Kidney.app

PERMIT-project / Introduction

ytakemon / TheAgingKidney

fraca98 / C-pkdCystSelection

halbritter-lab / pld-progression-grouper

p4rkerw / Wilson_GBio_2024

temmyfioye / predictingchronickidneydisease

Abdulmuqe / Chronic-Kidney-Disease-Prediction-Using-ML

fraca98 / Python-pkdCystsSelection

mwiens91 / kidney-arterial-tree