kidney

There are 0 repository under kidney topic.

• muellerdo / kits19.MIScnn

  Kidney Tumor Segmentation Challenge 2019: MIScnn - 3D Residual U-Net

  deep-learningkidneykits19segmentationu-netmedical-image-processingconvolutional-neural-networksmedical-image-segmentation
  Language:Python 36

• p4rkerw / Muto_Wilson_NComm_2020

  Workflow for analysis of healthy human kidney by snRNAseq and snATACseq

  allele-specific-expressionbioinformaticsgenomicskidneysingle-cellsingle-cell-atac-seqsingle-cell-rna-seq
  Language:R 23

• tarolangner / ukb_segmentation

  PyTorch implementation for 2.5D U-Net segmentation of UK Biobank neck-to-knee body MRI

  segmentationmriu-netkidneyparenchymapytorchdeep-learninguk-biobankneural-networkssemantic-segmentation
  Language:Python 18

• p4rkerw / Wilson_Muto_NComm_2022

  Containerized workflow for analysis of human diabetic kidney disease by snRNA-seq and snATAC-seq

  allele-specificckddiabetesheritabilitykidneysingle-cell-atac-seqsingle-cell-rna-seqsingle-cell-sequencing
  Language:R 12

• ShishuaiHu / BA-Net

  Code for [MLMI 2019] [KiPA22 Challenge] [AMOS 2022 Challenge] [MICCAI 2022 Workshop] Boundary-Aware Network for Medical Image Segmentation.

  abdominal-organkidneymedical-image-segmentation
  Language:Python 9
• epoc-aki

  alwinw / epoc-aki

  📈 Evaluation of the Predictive value of short-term Oliguria and minor Creatinine increases for Acute Kidney Injury in ICU

  rtime-seriescreatinineoliguriastatistical-analysislogistic-regressionakiacute-kidney-failurekidneyclassificationrmdbookdown
  Language:R 8

• fitushar / multi-label-weakly-supervised-classification-of-body-ct

  A rule-based algorithm enabled the automatic extraction of disease labels from tens of thousands of radiology reports. These weak labels were used to create deep learning models to classify multiple diseases for three different organ systems in body CT.

  weakly-supervised-learningct-scan-imagesrule-based-modeling3d-segmentation3d3d-classificationtensorflow23d-resnetctliver-diseasekidneykidney-disease-predictionkidney-diseaseliver-disease-predictionmulti-label-image-classificationmulti-label-diseasemachine-learningmulti-label-disease-classification
  Language:Python 7

• Oshlack / combes-organoid-paper

  Analysis code and output for the Combes kidney organoid scRNA-seq paper https://doi.org/10.1186/s13073-019-0615-0

  analysissingle-cellrna-seqkidneykidney-organoids
  Language:R 7

• junqiangchen / KiPA2022-Challenge

  KiPA2022——Multi-Structure Segment for Renal Cancer Treatment.

  ctdicefocal-losskidneypytorchunet3dkidneytumor
  Language:Python 6

• lazappi / phd-thesis-analysis

  Code for the analysis chapter of my PhD thesis looking at kidney organoid scRNA-seq data

  phd-thesisanalysisanalysis-websitekidneyorganoidssingle-cellrna-seqsingle-cell-rna-seqscrna-seq
  Language:R 6

• samisaf / Identifying-AKI-during-hospitalization-based-on-serum-creatinine-trends

  Implements an algorithm that helps identify episodes of acute kidney injury that develop during hospitalization

  acuteakiinjurykidneyrenal
  Language:Python 4

• ArianAzg / User-friendly-Graphical-User-Interface-for-Ultrasound-Scan-Processing

  User-friendly software for organizing/processing/annotating ultrasound scans of sea turtles

  heartkidneyliversea-turtlesultrasoundultrasound-scans
  Language:Python 3

• Layton-Lab / nephron

  Computational models for epithelial transport along the nephron.

  kidneycomputational-biologynephronphysiologymathematical-biology
  Language:Python 3

• lshpaner / kfre

  A Python library for kidney failure risk estimation using Tangri's KFRE model

  ckdkfrekidneykidney-disease-predictionpythonpython-library
  Language:Python 3

• AlmudenaBravoC / CAD-ultrasound-renal-diagnosis

  Development of a renal ultrasound computer aided tool using deep learning techniques.

  convolutional-neural-networksdeep-learningkidneyparenchymasegmentation-models
  Language:Jupyter Notebook 2

• mstadt / nephron

  This is latest version of sex-specific mathematical models for epithelial transport along the nephron. Models are implemented in Python 3.

  computational-biologykidneydiabetescomputational-physiologysex-specific-modelnephronrathumanpregnancy
  Language:Python 2

• AdrienJaugey / Mask-R-CNN-Inference-Tool

  Mask R-CNN Inference Tool used for Nephrology analysis

  cell-recognitionkidneymask-rcnnmatterport-mask-rcnn
  Language:Python 1

• covidclinical / Phase2.1AKIRPackage

  R Package to run statistical analyses for COVID-19 patients with acute kidney injury.

  akicovid-19kidney
  Language:R 1

• Epithelial-Systems-Biology-Laboratory / KTEA

  Repository for Kidney Tubule Expression Atlas project

  proteomicskidney
  Language:R 1

• fraca98 / pkdCystSelection

  Extension 3DSlicer for Manually Kidney Cysts Selection

  3dsliceradpkdkidney
  Language:Python 1

• halbritter-lab / kidney-genetics

  Kidney-Genetics - database of kidney-related genes

  databasegeneskidneykidney-diseasenephrologyraredisease
  Language:HTML 1

• KohSoonho / Kidney.app

  The formula of eGFR

  egfrbsaformulakidneyrshiny-apps
  Language:R 1

• myrical-app / myrical-v2

  🔬A revolutionary open-source tool for automated multi-central, domino-based kidney transplant matching.

  kidney-transplantationkidneykidney-allocationtransplantmedicalmedical-application
  Language:TypeScript 1

• PERMIT-project / Introduction

  Introduction to PERMIT project resources

  heart-failurepatientspatient-datarenalkidneyehr-phenotyping
  1

• taneishi / UNet_Glomerulus

  Glomerular Segmentation of Kidney Images with U-Net

  glomerulusmedical-imagingpytorchsegmentationu-nethubmapkidney
  Language:Python 1

• wahidpanda / Kideny-Stone-Detection-ML

  deep-neural-networkskidneykidney-diseasekidney-disease-predictionmachine-learning
  Language:Jupyter Notebook 1

• ytakemon / TheAgingKidney

  qtlkidneyagingbioinformatics-analysisgenomics
  Language:R 1

• darsydarssan / PestKidneyGrace

  To reproduce the work of Grace et al.

  pesticideskidneynhanes
  Language:Stata 0

• fraca98 / C-pkdCystSelection

  CystSegmentation - Kidney Cysts Segmentaion

  kidneyadpkd
  Language:C++ 0

• halbritter-lab / pld-progression-grouper

  PLD-Progression Grouper - visualize and analyze the progression of Polycystic Liver Disease (PLD) through user-inputted clinical data

  kidneykidney-diseaseliver-diseaserare-diseasepldpolycystic-liver-diseaseadpkdadpldprkcshsec63tlvntlv
  Language:Vue 0

• p4rkerw / Wilson_GBio_2024

  Containerized workflow for single cell detection of loss of Y chromosome and other mosaic chromosomal alterations in chronic kidney disease

  aneuploidyckdcopy-number-variationkidneysingle-cellsingle-cell-atac-seqsingle-cell-genomicssingle-cell-multiomicssingle-cell-rna-seqspatial-transcriptomicsloss-of-y-chromosomemosaic-chromosomal-alterationssomatic-mosaicism
  Language:R 0

• peter-ehmann / RenalAnalysis_SysPhysLab_S2019

  Analysis of five kidney function variables collected over 90 minutes (0, 30, 60, 90) in two experimental groups.

  rggplottidyversekidneyphysiology
  Language:R 0

• rebecarl / kidnApp

  Prototype drug dosage checker based on user-inputted GFR

  medical-informationmedicationrenalkidneydrugsclinical-pharmacologywebappspring-bootmysql
  Language:HTML 0

• temmyfioye / predictingchronickidneydisease

  Predicted chronic kidney disease using biomarkers with Random Forest

  kidneykidney-diseasekidney-disease-predictionrandom-forestrandom-forest-classifier
  Language:Jupyter Notebook 0

• fraca98 / Python-pkdCystsSelection

  CystSegmentation - Kidney Cysts Segmentaion

  adpkdkidney
  Language:Python

• mwiens91 / kidney-arterial-tree

  Draws accurate kidney-specific arterial networks

  bifurcating-treekidneynephron
  Language:JavaScript