4CE's repositories
visualization-notebooks
Jupyter Notebooks and other code for 4CE data visualizations.
PhaseX.2SqlDataExtraction
SQL and documentation to extract 4CE Phase 1.2 and 2.2 data files.
Phase2.1SqlDataExtraction
SQL code to generate Phase 2.1 CSV files
Phase2.1AKIRPackage
R Package to run statistical analyses for COVID-19 patients with acute kidney injury.
Phase2.1NeuroAnalysis
Analysis of "Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: a multinational cohort study"
Phase2.1NeuroRPackage
R Package to run statistical analyses for COVID-19 patients with neurological conditions.
Phase2.1NeuroRSummaries
Analysis of "Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: a multinational cohort study"
Phase2.2.bacterial_infections
Analysis of the bacterial infections trends in the children population
PhaseX.2QualityControlRpackage
Generate QC reports for 4CE phase 1.2 and phase 2.2 data
Version3SqlDataExtraction
SQL and documentation to extract 4CE Version 3 local patient-level and shared aggregate files.
Phase2.2.peds_temporalTrends
Temporal trends of distinct phenotypes before and during pandemic in children
Phase2.2PASCcondIRPackage
This package implements conditional independence testing procedures to identify codified concepts related to prior exposure to SARS-CoV-2 in 4CE Phase2.2 Data.