hubmap
There are 0 repository under hubmap topic.
hms-dbmi / viv
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
Language:JavaScript 257vitessce / vitessce
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
Language:JavaScript 146- Language:JavaScript 11
hubmapconsortium / ingest-validation-tools
HuBMAP data submission guidelines, and tools which check that submissions adhere to those guidelines.
Language:Python 8chrise96 / Weighted-Masks-Fusion
Weighted Masks Fusion (WMF) - Ensembling for Instance Segmentation.
Language:Python 7Utils for loading HuBMAP data formats
Language:Python 6Saharsh1005 / hubmap-kaggle-competition
Binary segmentation of multi organ tissue units while implementing latest vision transformer architectures
Language:Python 4- Language:TypeScript 2
chadrick-kwag / hubmap
kaggle hubmap kidney segmentation code
Language:Jupyter Notebook 1- Language:Python 1
- Language:Python 1
shreshtashetty / Hubmap-Kidney-Segmentation
Semantic Segmentation to identify glomeruli in kidney images
Language:Jupyter Notebook 1taneishi / UNet_Glomerulus
Glomerular Segmentation of Kidney Images with U-Net
Language:Python 1n1ghtf4l1 / automatic-dissection
Identify the locations of each functional tissue unit (FTU) in biopsy slides from several different organs.
Language:Jupyter Notebook 0hubmapconsortium-graveyard / img2zarr
Python utility for converting images to zarr chunked arrays
Language:PythonStyle guide for HuBMAP Portal development.
Language:JavaScript
