ehr-phenotyping
There are 0 repository under ehr-phenotyping topic.
- phenopacket-schema
phenopackets / phenopacket-schema
Repository for the GA4GH phenopacket schema
Language:Java 73 ritaranx / CACHE
[ML4H 2022] This is the code for our paper `Counterfactual and Factual Reasoning over Hypergraphs for Interpretable Clinical Predictions on EHR'.
Language:Python 22CogStack / nlp2phenome
using AI model to infer patient phenotypes from identified named entities (instances of biomedical concepts)
Language:Python 10CNAG-Biomedical-Informatics / convert-pheno
A software toolkit for the interconversion of standard data models for phenotypic data
Language:Perl 9aafshar / TASTE
Code accompanying our ACM CHIL paper: "TASTE: Temporal and Static Tensor Factorization for Phenotyping Electronic Health Records"
Language:MATLAB 7centre-for-health-informatics / Django-OMOP
The OMOP Common Data Model(v6) implemented in Django (v3)
Language:Python 6NHLI-Respiratory-Epi / SNOMED-CT-codelists
How to: create SNOMED CT codelists
Language:Stata 4- Language:Java 2
levrex / EHR-Clustering-RA
Cast different EHR (electronic health record) layers to a shared latent space to identify patient subtypes
Language:Jupyter Notebook 1How to: find acute exacerbation of COPD events in UK primary care electronic healthcare records
Language:Stata 1PERMIT-project / Introduction
Introduction to PERMIT project resources
- Topic_modeling_EHR
zhaojuanwendy / Topic_modeling_EHR
This project shows a method with a topic modeling approach: non-negative matrix factorization (NMF), used in EHR for subphenotyping and identifying the relationship between phenotypes and genetic variants
Language:Jupyter Notebook 1 How to: create drug codelists for recorded prescriptions
Language:Stata 0zimolzak / healthcare-data-quality
Lecture slides on Electronic Health Record Data Quality
Language:Makefile
