aneuploidy

There are 0 repository under aneuploidy topic.

• AntonioDeFalco / SCEVAN

  R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.

  aneuploidyclonal-analysisclonal-evolutioncopy-number-variationcopynumbermicroenvironmentscrna-pipelinescrna-seqscrna-seq-analysissingle-cellsubclonal-deconvolutionsubclone-identificationtumor-classificationtumor-evolutiontumor-heterogeneity
  Language:HTML 82

• VivianWei1328 / STORK_test

  Code for STORK. Rapid Nanopore Sequencing–Based Screen for Aneuploidy in Reproductive Care. “Copyright © 2022 The Trustees of Columbia University in the City of New York. All Rights Reserved.”

  nanoporestorkaneuploidynanopore-sequencing
  1

• Mike-Chester / aneuploidy_dynamics

  Python script to model mixed disomic and tetrasomic inheritance in a population of allotetraploid plants.

  allopolyploidmeiosisaneuploidy
  Language:Python 0

• p4rkerw / Wilson_GBio_2024

  Containerized workflow for single cell detection of loss of Y chromosome and other mosaic chromosomal alterations in chronic kidney disease

  aneuploidyckdcopy-number-variationkidneysingle-cellsingle-cell-atac-seqsingle-cell-genomicssingle-cell-multiomicssingle-cell-rna-seqspatial-transcriptomicsloss-of-y-chromosomemosaic-chromosomal-alterationssomatic-mosaicism
  Language:R 0

• TWvR / AneufinderFileFilter

  Easy filtering of Aneufinder model files based on QC measurements

  aneuploidysckaryo-seqaneufinder
  Language:R 0

• esteinig / cerebro

  Metagenomic diagnostics stack for low abundance sample types and clinical reporting

  aneuploidybraincentral-nervous-systemdiagnosticsilluminametagenomicsproductionpublic-health
  Language:Rust